Name: Natronococcus roseus CG-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24068

Type strain:

Species: Natronococcus roseus

Strain Designation: CG-1

Culture col. no.: DSM 25473, CECT 7984, IBRC-M 10656, JCM 17958

Strain history: <- A. Ventosa, Univ. Seville, Dept. Microbiol. Parasitol., Spain; CG-1 <- A. Castillo. Deposited as the type strain of Natronococcus roseus, the 16S rRNA gene sequence of this strain is identical to AB771436 (from JCM 17958) and is not identical with FR877778

NCBI tax ID(s): 1052014 (species)

SI-ID 386788

CECT 7984, JCM 17958

Section

Natronococcus roseus CG-1 is an aerobe, mesophilic, Gram-variable archaeon that was isolated from sediment of soda lake.

coccus-shaped
Gram-variable
aerobe
mesophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Halobacteria*
	Order	*Natrialbales*
	Family	*Natrialbaceae*
	Genus	*Natronococcus*
	Species	**Natronococcus roseus**
	Full Scientific Name (LPSN)	Natronococcus roseus Corral et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #30458]	Gram stain	variable

[Ref.: #30458]	Cell length	1.5 µm

[Ref.: #30458]	Cell width	1.5 µm

[Ref.: #30458]	Cell shape	coccus-shaped

[Ref.: #30458]	Motility	no

[Ref.: #20605]

Incubation period

3-7 days

[Ref.: #30458]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #20605]

Culture medium

NATRONOBACTERIA MEDIUM (DSMZ Medium 371)

[Ref.: #20605]

Culture medium growth

[Ref.: #20605]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20605]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #20605]	growth	37 °C
[Ref.: #30458]	growth	30-50 °C
[Ref.: #30458]	optimum	41 °C

[Ref.: #20605]	Temperature range	mesophilic
[Ref.: #30458]	Temperature range	thermophilic

	pH	Kind of pH		pH
[Ref.: #30458]			optimum	9.25
[Ref.: #30458]			growth	08-11

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30458]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30458]		NaCl		growth	15-30	%
[Ref.: #30458]		NaCl		optimum	25	%

[Ref.: #30458]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30458]	acetate ChEBI	+	carbon source
[Ref.: #30458]	asparagine ChEBI	+	carbon source
[Ref.: #30458]	fructose ChEBI	+	carbon source
[Ref.: #30458]	glucose ChEBI	+	carbon source
[Ref.: #30458]	glutamate ChEBI	+	carbon source
[Ref.: #30458]	glycine ChEBI	+	carbon source
[Ref.: #30458]	lactate ChEBI	+	carbon source
[Ref.: #30458]	lactose ChEBI	+	carbon source
[Ref.: #30458]	maltose ChEBI	+	carbon source
[Ref.: #30458]	mannitol ChEBI	+	carbon source
[Ref.: #30458]	nitrate ChEBI	+	reduction
[Ref.: #30458]	propionate ChEBI	+	carbon source
[Ref.: #30458]	pyruvate ChEBI	+	carbon source
[Ref.: #30458]	serine ChEBI	+	carbon source
[Ref.: #30458]	sorbitol ChEBI	+	carbon source
[Ref.: #30458]	succinate ChEBI	+	carbon source
[Ref.: #30458]	sucrose ChEBI	+	carbon source
[Ref.: #30458]	threonine ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30458]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20605]	Sample type/isolated from	sediment of soda lake
[Ref.: #20605]	Geographic location (country and/or sea, region)	Inner Mongolia, lake Chagannor
[Ref.: #20605]	Country	China
[Ref.: #20605]	Country ISO 3 Code	CHN
[Ref.: #20605]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment
#Condition	#Alkaline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB771436 (>99% sequence identity) for Natrialbaceae from Microbeatlas

Aquatic Samples	204
Soil Samples	99
Animal Samples	446
Plant Samples	21
Total Samples	770

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20605]	Natronococcus roseus partial 16S rRNA gene, type strain CG-1T	FR877778	1541	ENA	1052014 tax ID
[Ref.: #20605]	Natronococcus roseus gene for 16S ribosomal RNA, partial sequence	AB771436	1474	ENA	1052014 tax ID

[Ref.: #20605]	GC-content	62.1 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #30458]	GC-content	62.1 mol%

Availability in culture collections External links

[Ref.: #20605]

Culture collection no.

DSM 25473, CECT 7984, IBRC-M 10656, JCM 17958

[Ref.: #88038]

SI-ID 386788

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Natronococcus roseus sp. nov., a haloalkaliphilic archaeon from a hypersaline lake.	Corral P, Gutierrez MC, Castillo AM, Dominguez M, Lopalco P, Corcelli A, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.036558-0	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20605

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25473

#30458

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26793 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88038

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID386788.1 )

#26793

IJSEM 104 2013 ( DOI 10.1099/ijs.0.036558-0 , PubMed 22345136 )

* These data were automatically processed and therefore are not curated

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