Catenulispora graminis (DSM 45863, KACC 15070, NBRC 107755)

Name: Catenulispora graminis (DSM 45863, KACC 15070, NBRC 107755)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 23350

Type strain

Strain Designation BR-34

Culture col. no. DSM 45863 KACC 15070 NBRC 107755 BR-34

NCBI tax ID(s) 910543

Special Collections DSMZ Literature strains

History <- NBRC; NBRC 107755 <- K.-S. Whang, Mokwon Univ.; BR-34

Links

Catenulispora graminis BR-34 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from rhizosphere soil of Phyllostachys nigro var. henonis.

spore-forming Gram-positive rod-shaped aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 397860

NBRC 107755,DSM 45863

@ref 20215

Last LPSN update 2026-02-09 11:23:44

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Catenulisporales

Family Catenulisporaceae

Genus Catenulispora

Species Catenulispora graminis

Full scientific name Catenulispora graminis Lee et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Cell width	Cell shape
30415	positive	1 µm	rod-shaped

Pigmentation

30415

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
19186	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
19186	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
19186	positive	growth	28
30415	positive	growth	15-37

Culture pH

@ref	Ability	Type	PH	PH range
30415	positive	growth	04-06	acidophile

Physiology and metabolism

Oxygen tolerance

30415

Oxygen toleranceaerobe

Spore formation

30415

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30415	NaCl	positive	growth	1 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30415	17057 ChEBI	cellobiose	+	carbon source
30415	28757 ChEBI	fructose	+	carbon source
30415	33984 ChEBI	fucose	+	carbon source
30415	28260 ChEBI	galactose	+	carbon source
30415	28087 ChEBI	glycogen	+	carbon source
30415	17306 ChEBI	maltose	+	carbon source
30415	29864 ChEBI	mannitol	+	carbon source
30415	37684 ChEBI	mannose	+	carbon source
30415	33942 ChEBI	ribose	+	carbon source
30415	27082 ChEBI	trehalose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30415	alkaline phosphatase	+	3.1.3.1
30415	alpha-galactosidase	+	3.2.1.22
30415	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
19186	rhizosphere soil of Phyllostachys nigro var. henonis	Damyang	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence HM748599 (>99% sequence identity) for Catenulispora graminis subclade from Microbeatlas

Aquatic Samples	35
Soil Samples	1024
Animal Samples	26
Plant Samples	71
Total Samples	1156

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
19186	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
19186	Catenulispora graminis strain BR-34 16S ribosomal RNA gene, partial sequence	HM748599	1450		910543

GC content

19186

GC-content (mol%)72.8

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Catenulispora fulva sp. nov., isolated from forest soil.	Lee HJ, Whang KS	Int J Syst Evol Microbiol	10.1099/ijsem.0.000711	2015
Phylogeny	Catenulispora graminis sp. nov., a rhizobacterium from bamboo (Phyllostachys nigro var. henonis) rhizosphere soil.	Lee HJ, Han SI, Whang KS	Int J Syst Evol Microbiol	10.1099/ijs.0.035501-0	2011

References

#19186	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45863
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26751	IJSEM 2589 2012 ( DOI 10.1099/ijs.0.035501-0 , PubMed 22199217 )
#30415	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26751
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Catenulispora graminis (DSM 45863, KACC 15070, NBRC 107755)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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