Caballeronia glathei (DSM 50014, ATCC 29195, CIP 105421)

Name: Caballeronia glathei (DSM 50014, ATCC 29195, CIP 105421)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1915

Type strain

Strain Designation N 15, N15

Culture col. no. DSM 50014 ATCC 29195 CIP 105421 CCUG 7431 CCM 2742 7 more

NCBI tax ID(s) 60547

Special Collections DSMZ CCUG JCM KCTC CIP

Links

Caballeronia glathei N 15 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from lateritic soil.

Gram-negative motile rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 7961

LMG 14190,ATCC 29195,CCRC 13900,DSM 50014,JCM 10563,CCUG 7431,CCM 2742,CIP 105421,KCTC 2968,BCRC 13900,CFBP 4791,CCUG 0116

@ref 20215

Last LPSN update 2025-12-16 09:47:13

Domain Pseudomonadati

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Burkholderiaceae

Genus Caballeronia

Species Caballeronia glathei

Full scientific name Caballeronia glathei (Zolg and Ottow 1975) Dobritsa and Samadpour 2016

Synonyms (4)

Pseudomonas glathei
Paraburkholderia glathei
Burkholderia glathei
Burkholderia glathei

BacDive ID	Other strains from **Caballeronia glathei** (2)	Type strain
1914	C. glathei N 16, DSM 50012, ATCC 29196
1922	C. glathei AB V, DSM 6756, LMG 19512

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
119638	negative	rod-shaped
125438	negative		97.482
125439	negative		92.8

Pigmentation

@ref	Production	Name
119638		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12605	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
12605	GLUCOSE YEAST EXTRACT MEDIUM (DSMZ Medium 54)	Medium recipe at MediaDive	Name: GLUCOSE YEAST EXTRACT MEDIUM (DSMZ Medium 54) Composition: CaCO3 20.0 g/l Glucose 20.0 g/l Agar 17.0 g/l Yeast extract 10.0 g/l Distilled water
41971	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
119638	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
12605	positive	growth	30	mesophilic
41971	positive	growth	30	mesophilic
44999	positive	growth	30	mesophilic
67770	positive	growth	37	mesophilic
119638	positive	growth	5-37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
44999	aerobe
119638	obligate aerobe
125438	aerobe	90.697
125439	aerobe	98.1

Spore formation

@ref	Spore formation	Confidence
125439		92.5

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119638	NaCl	positive	growth	0-4 %
119638	NaCl		growth	6 %
119638	NaCl		growth	8 %
119638	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
119638	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
119638	17632 ChEBI	nitrate	+	reduction
119638	17632 ChEBI	nitrate	-	respiration
119638	16301 ChEBI	nitrite	-	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
119638	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
119638	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
119638	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
119638	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
119638	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119638	caseinase	-	3.4.21.50
119638	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
119638	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119638	gelatinase	-
68369	gelatinase	-		from API 20NE
119638	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
119638	lipase	-
68382	lipase (C 14)	-		from API zym
119638	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119638	ornithine decarboxylase	-	4.1.1.17
119638	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
119638	tryptophan deaminase	-
119638	tween esterase	-
119638	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	phenylacetate degradation (aerobic)	100	5 of 5
66794	coenzyme A metabolism	100	4 of 4
66794	butanoate fermentation	100	4 of 4
66794	resorcinol degradation	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	valine metabolism	100	9 of 9
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	glycogen metabolism	100	5 of 5
66794	taurine degradation	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	methylglyoxal degradation	100	5 of 5
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	biotin biosynthesis	100	4 of 4
66794	L-lactaldehyde degradation	100	3 of 3
66794	formaldehyde oxidation	100	3 of 3
66794	adipate degradation	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	ethanol fermentation	100	2 of 2
66794	threonine metabolism	100	10 of 10
66794	folate polyglutamylation	100	1 of 1
66794	4-hydroxymandelate degradation	100	9 of 9
66794	acetate fermentation	100	4 of 4
66794	methanofuran biosynthesis	100	5 of 5
66794	ubiquinone biosynthesis	100	7 of 7
66794	reductive acetyl coenzyme A pathway	100	7 of 7
66794	photosynthesis	100	14 of 14
66794	Entner Doudoroff pathway	100	10 of 10
66794	lipoate biosynthesis	100	5 of 5
66794	vitamin B1 metabolism	100	13 of 13
66794	palmitate biosynthesis	95.45	21 of 22
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	citric acid cycle	92.86	13 of 14
66794	leucine metabolism	92.31	12 of 13
66794	phenylalanine metabolism	92.31	12 of 13
66794	vitamin B12 metabolism	91.18	31 of 34
66794	proline metabolism	90.91	10 of 11
66794	pentose phosphate pathway	90.91	10 of 11
66794	starch degradation	90	9 of 10
66794	propionate fermentation	90	9 of 10
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	NAD metabolism	88.89	16 of 18
66794	chorismate metabolism	88.89	8 of 9
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	ketogluconate metabolism	87.5	7 of 8
66794	isoleucine metabolism	87.5	7 of 8
66794	gluconeogenesis	87.5	7 of 8
66794	alanine metabolism	86.21	25 of 29
66794	heme metabolism	85.71	12 of 14
66794	propanol degradation	85.71	6 of 7
66794	tyrosine metabolism	85.71	12 of 14
66794	phenol degradation	85	17 of 20
66794	urea cycle	84.62	11 of 13
66794	degradation of sugar acids	84	21 of 25
66794	arginine metabolism	83.33	20 of 24
66794	glycolysis	82.35	14 of 17
66794	glutamate and glutamine metabolism	82.14	23 of 28
66794	vitamin B6 metabolism	81.82	9 of 11
66794	tryptophan metabolism	81.58	31 of 38
66794	purine metabolism	80.85	76 of 94
66794	3-chlorocatechol degradation	80	4 of 5
66794	myo-inositol biosynthesis	80	8 of 10
66794	peptidoglycan biosynthesis	80	12 of 15
66794	gallate degradation	80	4 of 5
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	histidine metabolism	79.31	23 of 29
66794	pyrimidine metabolism	77.78	35 of 45
66794	allantoin degradation	77.78	7 of 9
66794	sulfate reduction	76.92	10 of 13
66794	methionine metabolism	76.92	20 of 26
66794	glycogen biosynthesis	75	3 of 4
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	CMP-KDO biosynthesis	75	3 of 4
66794	toluene degradation	75	3 of 4
66794	dTDPLrhamnose biosynthesis	75	6 of 8
66794	degradation of pentoses	75	21 of 28
66794	sulfopterin metabolism	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	lysine metabolism	73.81	31 of 42
66794	non-pathway related	73.68	28 of 38
66794	flavin biosynthesis	73.33	11 of 15
66794	3-phenylpropionate degradation	73.33	11 of 15
66794	degradation of hexoses	72.22	13 of 18
66794	cysteine metabolism	72.22	13 of 18
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	glutathione metabolism	71.43	10 of 14
66794	oxidative phosphorylation	70.33	64 of 91
66794	degradation of sugar alcohols	68.75	11 of 16
66794	carotenoid biosynthesis	68.18	15 of 22
66794	lipid metabolism	67.74	21 of 31
66794	octane oxidation	66.67	2 of 3
66794	sulfoquinovose degradation	66.67	2 of 3
66794	glycolate and glyoxylate degradation	66.67	4 of 6
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	degradation of aromatic, nitrogen containing compounds	66.67	8 of 12
66794	acetoin degradation	66.67	2 of 3
66794	d-mannose degradation	66.67	6 of 9
66794	methane metabolism	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	androgen and estrogen metabolism	62.5	10 of 16
66794	isoprenoid biosynthesis	61.54	16 of 26
66794	coenzyme M biosynthesis	60	6 of 10
66794	cellulose degradation	60	3 of 5
66794	creatinine degradation	60	3 of 5
66794	metabolism of amino sugars and derivatives	60	3 of 5
66794	glycine betaine biosynthesis	60	3 of 5
66794	hydrogen production	60	3 of 5
66794	vitamin K metabolism	60	3 of 5
66794	bile acid biosynthesis, neutral pathway	58.82	10 of 17
66794	methanogenesis from CO2	58.33	7 of 12
66794	polyamine pathway	56.52	13 of 23
66794	metabolism of disaccharids	54.55	6 of 11
66794	phosphatidylethanolamine bioynthesis	53.85	7 of 13
66794	pantothenate biosynthesis	50	3 of 6
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	lactate fermentation	50	2 of 4
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	cyclohexanol degradation	50	2 of 4
66794	carnitine metabolism	50	4 of 8
66794	ascorbate metabolism	50	11 of 22
66794	4-hydroxyphenylacetate degradation	50	5 of 10
66794	glycine metabolism	50	5 of 10
66794	phenylmercury acetate degradation	50	1 of 2
66794	quinate degradation	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	kanosamine biosynthesis II	50	1 of 2
66794	d-xylose degradation	45.45	5 of 11
66794	cholesterol biosynthesis	45.45	5 of 11
66794	dolichyl-diphosphooligosaccharide biosynthesis	45.45	5 of 11
66794	nitrate assimilation	44.44	4 of 9
66794	aclacinomycin biosynthesis	42.86	3 of 7
66794	O-antigen biosynthesis	40	2 of 5
66794	factor 420 biosynthesis	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	arachidonic acid metabolism	38.89	7 of 18
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	sphingosine metabolism	33.33	2 of 6
66794	enterobactin biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	chlorophyll metabolism	27.78	5 of 18
66794	catecholamine biosynthesis	25	1 of 4
66794	vitamin E metabolism	25	1 of 4

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119638	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
12605	-	-	-	-	-	-	-	-	+	-	+	+/-	+	-	+	+/-	-	+/-	+/-	-	+
12605	+	-	-	-	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	+	+
12605	+	-	-	-	-	-	-	+	+	+	+	+	+	-	+	+	-	+	+	+	+
12605	-	-	-	+/-	+/-	-	-	+	-	-	+/-	-	-	+/-	-	-	-	-	-	-	+
12605	-	-	-	-	-	-	-	+	+	+	+	+	+	-	+	-	-	+	+	+	+
12605	-	-	-	-	-	-	-	+	+	+	+	+	+	-	+	+	-	+	+	+	+
12605	-	-	-	-	-	-	-	+	+	+	+	+	+	-	+	+	-	+	+	+	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
119638	not determinedn.d.	+	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	+	+	-	+	-	+	+	+	-	+	+	-	-	+	-	-	+	-	-	-	+	+	+	+	+	+	+	+	+	+	+	+	+	+	-	-	+	+	+	+	+	+	-	-	+	-	-	-	+	-	+	-	+	+	+	+	+	+	-	+	-	+	-	+	-	+	+	+	+	-	+	-	+	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Geologic
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
12605	lateritic soil	Gießen	Germany	DEU	Europe
44999	Soil		Germany	DEU	Europe
67770	Fossil lateritic soil		Germany	DEU	Europe
119638	Environment, Lateritic soil	Giessen, Hessen	Germany	DEU	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12605	1	Risk group (German classification) According to TRBA 466
119638	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Bglat_v2 assembly for Caballeronia glathei LMG 14190	contig	GCA_000751215	60547.9	2630968591	60547	47.65
66792	Burkholderia glathei strain LMG14190	contig		60547.5		60547	31.8
67770	SOAPdenovo v1.05 assembly for Caballeronia glathei DSM 50014	contig	GCA_000698595	60547.6	2636416141	60547	7.92

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Burkholderia glathei gene for 16S rRNA, strain: ATCC 29195	AB021374	1491	60547
20218	Burkholderia glathei strain CIP 105421 16S ribosomal RNA gene, partial sequence	EU024167	1313	60547
12605	Burkholderia glathei 16S ribosomal RNA gene, partial sequence	U96935	1606	60547
124043	Burkholderia glathei strain LMG 14190 16S ribosomal RNA gene, partial sequence.	HQ849084	1124	60547

GC content

@ref	GC-content (mol%)	Method
67770	64.8	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Caballeronia glathei LMG 14190
NCBI: GCA_000751215

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	92.50	no
125439	motility	BacteriaNetⓘ	yes	58.60	no
125439	gram_stain	BacteriaNetⓘ	negative	92.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	98.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Burkholderia glathei strain DSM 50014
PATRIC: 60547.6

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.48	no
125438	anaerobic	anaerobicⓘ	no	96.65	no
125438	spore-forming	spore-formingⓘ	no	84.84	no
125438	aerobic	aerobicⓘ	yes	90.70	yes
125438	thermophilic	thermophileⓘ	no	98.00	yes
125438	flagellated	motile2+ⓘ	yes	86.12	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Synthesis and Degradation of the Phytohormone Indole-3-Acetic Acid by the Versatile Bacterium Paraburkholderia xenovorans LB400 and Its Growth Promotion of Nicotiana tabacum Plant.	Vega-Celedon P, Castillo-Novales D, Bravo G, Cardenas F, Romero-Silva MJ, Seeger M.	Plants (Basel)	10.3390/plants13243533	2024
Genetics	PAAR Proteins Are Versatile Clips That Enrich the Antimicrobial Weapon Arsenals of Prokaryotes.	Zhang Z, Liu Y, Zhang P, Wang J, Li D, Li YZ.	mSystems	10.1128/msystems.00953-21	2021
	The Exopolysaccharide Cepacian Plays a Role in the Establishment of the Paraburkholderia phymatum - Phaseolus vulgaris Symbiosis.	Liu Y, Bellich B, Hug S, Eberl L, Cescutti P, Pessi G.	Front Microbiol	10.3389/fmicb.2020.01600	2020
	Application of qPCR assays based on haloacids transporter gene dehp2 for discrimination of Burkholderia and Paraburkholderia.	Su X, Shi Y, Li R, Lu ZN, Zou X, Wu JX, Han ZG.	BMC Microbiol	10.1186/s12866-019-1411-0	2019
Metabolism	Bioconversion of Biologically Active Indole Derivatives with Indole-3-Acetic Acid-Degrading Enzymes from Caballeronia glathei DSM50014.	Sadauskas M, Statkeviciute R, Vaitekunas J, Meskys R	Biomolecules	10.3390/biom10040663	2020
Phylogeny	Burkholderia megalochromosomata sp. nov., isolated from grassland soil.	Baek I, Seo B, Lee I, Lee K, Park SC, Yi H, Chun J	Int J Syst Evol Microbiol	10.1099/ijs.0.000046	2015
Phylogeny	Burkholderia jiangsuensis sp. nov., a methyl parathion degrading bacterium, isolated from methyl parathion contaminated soil.	Liu XY, Li CX, Luo XJ, Lai QL, Xu JH	Int J Syst Evol Microbiol	10.1099/ijs.0.064444-0	2014
Phylogeny	Burkholderia grimmiae sp. nov., isolated from a xerophilous moss (Grimmia montana).	Tian Y, Kong BH, Liu SL, Li CL, Yu R, Liu L, Li YH	Int J Syst Evol Microbiol	10.1099/ijs.0.045492-0	2012
Phylogeny	Burkholderia zhejiangensis sp. nov., a methyl-parathion-degrading bacterium isolated from a wastewater-treatment system.	Lu P, Zheng LQ, Sun JJ, Liu HM, Li SP, Hong Q, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.035428-0	2011

References

#12605	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50014
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#41971	; Curators of the CIP;
#44999	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 7431
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#119638	Collection of Institut Pasteur ; Curators of the CIP; CIP 105421
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Caballeronia glathei (DSM 50014, ATCC 29195, CIP 105421)

Name and taxonomic classification

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