Name: Bradyrhizobium sp. 309
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1808

Type strain:

Species: Bradyrhizobium sp.

Strain Designation: 309

Culture col. no.: DSM 5968, ATCC 35642, TAL 309, CB 756

Strain history: <- ATCC <- P. Somasegaran TAL, 309 <- J.M. Vincent <- D.O. Norris, CB 756

NCBI tax ID(s): 376 (species)

SI-ID 1353

LMG 8319, ICMP 2095, PDDCC 2095, ATCC 35642, DSM 5968, CECT 4449, DSM 1984

Other strains from Bradyrhizobium sp.

B. sp. DSM 1984, TAL 309
B. sp. 61A118, DSM 5966, ATCC 35280, TAL ...
B. sp. IHP 195, DSM 5969, ATCC 35644, ...
B. sp. 28v, TUX28v, DSM 18452, HAMBI 2912
B. sp. 98m, TUX98m, DSM 18453, HAMBI 2913
B. sp. Leaf396, DSM 102579
B. sp. Leaf401, DSM 102580
B. sp. SR83, DSM 21560
B. sp. AP10, DSM 21562
B. sp. CCUG 42968
B. sp. CCUG 45072
B. sp. CCUG 49693
B. sp. CCUG 49958
B. sp. CCUG 50520
B. sp. CCUG 52223
B. sp. CCUG 53028
B. sp. CCUG 57689
B. sp. CCUG 57803
B. sp. CCUG 57804
B. sp. CCUG 57805
B. sp. CCUG 57807
B. sp. CCUG 57808
B. sp. CCUG 57809
B. sp. CCUG 57810
B. sp. CCUG 57811
B. sp. CCUG 57812
B. sp. CCUG 57813
B. sp. CCUG 57868
B. sp. CCUG 57907
B. sp. CCUG 57908
B. sp. CCUG 57909
B. sp. CCUG 57964, LMG 12187
B. sp. CCUG 57965, LMG 11795
B. sp. CCUG 59660
B. sp. CCUG 59956
B. sp. CCUG 61868
B. sp. CCUG 62248
B. sp. JCM 18004
B. sp. JCM 18382
B. sp. JCM 20936, ATCC 10325, IAM 13589, ...
B. sp. I71, DSM 112639

Section

Bradyrhizobium sp. 309 is a mesophilic, motile bacterium of the family Nitrobacteraceae.

motile
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Nitrobacteraceae*
	Genus	*Bradyrhizobium*
	Full Scientific Name (LPSN)	Bradyrhizobium Jordan 1982

Synonym

Agromonas

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.998

[Ref.: #69480]	Motility	yes Confidence in %95.328

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2395]

Culture medium

RHIZOBIUM MEDIUM (DSMZ Medium 98)

[Ref.: #2395]

Culture medium growth

[Ref.: #2395]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2395]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2395]			growth	30 °C

[Ref.: #2395]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.991

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Bradyrhizobium genosp. SA-4 str. CB756	GCA_000473125	scaffold	GenBank	936455 tax ID	*
[Ref.: #66792]	Bradyrhizobium genosp. SA-4 str. CB756	936455.3	wgs	PATRIC	936455 tax ID	*
[Ref.: #66792]	Bradyrhizobium genosp. SA-4 CB756	2516653048	draft	JGI IMG/M	936455 tax ID	*
[Ref.: #66792]	Bradyrhizobium arachidis CB756	GCA_021052265	complete	GenBank	858423 tax ID	*
[Ref.: #66792]	Bradyrhizobium arachidis strain CB756	858423.14	complete	PATRIC	858423 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Bradyrhizobium genosp. SA-4 str. CB756 PATRIC: 936455.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bradyrhizobium arachidis CB756 NCBI: GCA_021052265.1
[Ref.: #69480]	flagellated	no	69.747	no
[Ref.: #69480]	gram-positive	no	98.04	no
[Ref.: #69480]	anaerobic	no	97.868	no
[Ref.: #69480]	aerobic	yes	93.019	no
[Ref.: #69480]	halophile	no	94.252	no
[Ref.: #69480]	spore-forming	no	92.854	no
[Ref.: #69480]	motile	yes	87.301	no
[Ref.: #69480]	thermophile	no	99.613	no
[Ref.: #69480]	glucose-util	yes	87.814	no
[Ref.: #69480]	glucose-ferment	no	90.338	no

Availability in culture collections External links

[Ref.: #2395]

Culture collection no.

DSM 5968, ATCC 35642, TAL 309, CB 756

[Ref.: #71454]

SI-ID 1353

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Functional and genetic diversity of native rhizobial isolates nodulating cowpea (Vigna unguiculata L. Walp.) in Mozambican soils.	Simbine MG, Mohammed M, Jaiswal SK, Dakora FD	Sci Rep	10.1038/s41598-021-91889-7	2021	*
Phylogeny	Studies of Phylogeny, Symbiotic Functioning and Ecological Traits of Indigenous Microsymbionts Nodulating Bambara Groundnut (Vigna subterranea L. Verdc) in Eswatini.	Dlamini ST, Jaiswal SK, Mohammed M, Dakora FD	Microb Ecol	10.1007/s00248-021-01684-0	2021	*
Phylogeny	Insights into the Phylogeny, Nodule Function, and Biogeographic Distribution of Microsymbionts Nodulating the Orphan Kersting's Groundnut [Macrotyloma geocarpum (Harms) Marechal & Baudet] in African Soils.	Mohammed M, Jaiswal SK, Dakora FD	Appl Environ Microbiol	10.1128/AEM.00342-19	2019	*
Metabolism	Effect of short-term N(2) deficiency on expression of the ureide pathway in cowpea root nodules.	Smith PM, Winter H, Storer PJ, Bussell JD, Schuller KA, Atkins CA	Plant Physiol	10.1104/pp.010714	2002	*

References

#2395

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5968

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71454

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID1353.1 )

* These data were automatically processed and therefore are not curated

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Bradyrhizobium genosp. SA-4 str. CB756

Bradyrhizobium arachidis CB756

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