Xylophilus ampelinus (DSM 7250, ATCC 33914, CNBP 1192)

Name: Xylophilus ampelinus (DSM 7250, ATCC 33914, CNBP 1192)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17954

Type strain

Culture col. no. DSM 7250 ATCC 33914 CNBP 1192 LMG 5856 NCPPB 2217 3 more

NCBI tax ID(s) 54067

Special Collections DSMZ CCUG

History DSMZ <- NCPPB <- C. G. Panagopoulos

Links

Xylophilus ampelinus DSM 7250 is a plant pathogen that was isolated from Vitis vinifera.

plant pathogen 16S sequence Bacteria

Name and taxonomic classification

SI-ID 92461

LMG 5856,ATCC 33914,CECT 547,DSM 3584,ICMP 4298,LMG 5857,LMG 5858,LMG 5949,NCPPB 2217,PDDCC 4298,LMG 515,ICMP 8920,CCUG 21976,DSM 7250,CCM 4479,CFBP 1192,CFBP 3674,CECT 7646

@ref 20215

Last LPSN update 2026-05-29 08:29:08

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Xylophilus

Species Xylophilus ampelinus

Full scientific name Xylophilus ampelinus (Panagopoulos 1969) Willems et al. 1987

Synonyms (1)

Xanthomonas ampelina

BacDive ID	Other strains from **Xylophilus ampelinus** (1)	Type strain
142945	X. ampelinus CCUG 15840, NCPPB 2218, ATCC 29074, LMG 516

Morphology

Colony morphology

3072

Incubation period8-14 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
3072	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
3072	XYLOPHILUS MEDIUM (DSMZ Medium 587)		Medium recipe at MediaDive	Name: XYLOPHILUS MEDIUM (DSMZ Medium 587) Composition: CaCO3 20.0 g/l Agar 15.0 g/l D-Galactose 10.0 g/l Yeast extract 10.0 g/l Ferric ammonium citrate 0.25 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
3072	positive	growth	25
47532	positive	growth	24

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Shrub (Scrub)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Sampling date
3072	Vitis vinifera	Vitis vinifera	Crete	Greece	GRC	Europe
47532	Vitis vinifera var. sultana		Crete	Greece	GRC	Europe	1966

Taxonmaps

69479

Global distribution of 16S sequence AF078758 (>99% sequence identity) for Variovorax from Microbeatlas

Aquatic Samples	178
Soil Samples	103
Animal Samples	174
Plant Samples	141
Total Samples	596

Interaction and safety

Risk assessment

@ref	Pathogenicity plant	Biosafety level	Biosafety level comment
3072		1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Xylophilus ampelinus 16S ribosomal RNA gene, partial sequence	AF078758	1518		54067
20218	Xylophilus ampelinus 16S rRNA gene, strain DSM 7250	AJ420330	1550		54067

GC content

@ref	GC-content (mol%)	Method
3072	68.0	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Native Cultivable Bacteria from the Blueberry Microbiome as Novel Potential Biocontrol Agents.	Chacon FI, Sineli PE, Mansilla FI, Pereyra MM, Diaz MA, Volentini SI, Poehlein A, Meinhardt F, Daniel R, Dib JR.	Microorganisms	10.3390/microorganisms10050969	2022
	Combined use of 16S ribosomal DNA and 16S rRNA to study the bacterial community of polychlorinated biphenyl-polluted soil.	Nogales B, Moore ER, Llobet-Brossa E, Rossello-Mora R, Amann R, Timmis KN.	Appl Environ Microbiol	10.1128/aem.67.4.1874-1884.2001	2001
	A persistent and diverse airway microbiota present during chronic obstructive pulmonary disease exacerbations.	Huang YJ, Kim E, Cox MJ, Brodie EL, Brown R, Wiener-Kronish JP, Lynch SV.	OMICS	10.1089/omi.2009.0100	2010
	Characterization and Antimicrobial Activity of a Halophyte from the Asturian Coast (Spain): Limonium binervosum (G.E.Sm.) C.E.Salmon.	Sanchez-Hernandez E, Buzon-Duran L, Langa-Lomba N, Casanova-Gascon J, Lorenzo-Vidal B, Martin-Gil J, Martin-Ramos P.	Plants (Basel)	10.3390/plants10091852	2021
	Dwarf Pomegranate (Punica granatum L. var. nana): Source of 5-HMF and Bioactive Compounds with Applications in the Protection of Woody Crops.	Sanchez-Hernandez E, Buzon-Duran L, Cuchi-Oterino JA, Martin-Gil J, Lorenzo-Vidal B, Martin-Ramos P.	Plants (Basel)	10.3390/plants11040550	2022
Phylogeny	Xenophilus aerolatus sp. nov., isolated from air.	Kim SJ, Kim YS, Weon HY, Anandham R, Noh HJ, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijs.0.013185-0	2009
Phylogeny	Xylophilus rhododendri sp. nov., Isolated from Flower of Royal Azalea, Rhododendron schlippenbachii.	Lee SA, Heo J, Kim TW, Sang MK, Song J, Kwon SW, Weon HY	Curr Microbiol	10.1007/s00284-020-02194-x	2020

References

#3072	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7250
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#47532	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 21976
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Xylophilus ampelinus (DSM 7250, ATCC 33914, CNBP 1192)

Name and taxonomic classification

Morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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