Name: Salinivibrio costicola subsp. alcaliphilus 18AG
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 17243

Type strain:

Species: Salinivibrio costicola subsp. alcaliphilus

Strain Designation: 18AG

Culture col. no.: DSM 16359, ATCC BAA-952, CAIM 741

Strain history: <- I. Romano; 18AG

NCBI tax ID(s): 272773 (subspecies)

SI-ID 138999

ATCC BAA-952, DSM 16359, LMG 23659

Section

Salinivibrio costicola subsp. alcaliphilus 18AG is a mesophilic bacterium that was isolated from algal mat.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	"Vibrionales"
	Family	*Vibrionaceae*
	Genus	*Salinivibrio*
	Species	**Salinivibrio costicola subsp. alcaliphilus**
	Full Scientific Name (LPSN)	Salinivibrio costicola subsp. alcaliphilus Romano et al. 2005

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6401]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #6401]

Culture medium growth

[Ref.: #6401]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6401]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6401]			growth	30 °C

[Ref.: #6401]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6401]	Sample type/isolated from	algal mat
[Ref.: #6401]	Geographic location (country and/or sea, region)	Campania
[Ref.: #6401]	Country	Italy
[Ref.: #6401]	Country ISO 3 Code	ITA
[Ref.: #6401]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Microbial community	#Microbial mat
#Host	#Algae	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ640132 (>99% sequence identity) for Salinivibrio from Microbeatlas

Aquatic Samples	22
Soil Samples
Animal Samples	8
Plant Samples	9
Total Samples	39

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6401]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6401]	Salinivibrio sp. 18AG partial 16S rRNA gene, isolate 18AG	AJ640132	1539	ENA	272773 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Salinivibrio costicola subsp. alcaliphilus DSM 16359	GCA_001996185	contig	GenBank	272773 tax ID	*
[Ref.: #66792]	Salinivibrio costicola DSM 16359	2834259183	draft	JGI IMG/M	51367 tax ID	*

Availability in culture collections External links

[Ref.: #6401]

Culture collection no.

DSM 16359, ATCC BAA-952, CAIM 741

[Ref.: #86241]

SI-ID 138999

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Salinivibrio sharmensis sp. nov., a novel haloalkaliphilic bacterium from a saline lake in Ras Mohammed Park (Egypt).	Romano I, Orlando P, Gambacorta A, Nicolaus B, Dipasquale L, Pascual J, Giordano A, Lama L	Extremophiles	10.1007/s00792-010-0349-9	2011	*
Phylogeny	Salinivibrio costicola subsp. alcaliphilus subsp. nov., a haloalkaliphilic aerobe from Campania Region (Italy).	Romano I, Gambacorta A, Lama L, Nicolaus B, Giordano A	Syst Appl Microbiol	10.1016/j.syapm.2004.10.001	2005	*

References

#6401

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16359

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#86241

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID138999.1 )

* These data were automatically processed and therefore are not curated

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