Name: Nanobdella aerobiophila MJ1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169549

Type strain:

Species: Nanobdella aerobiophila

Strain Designation: MJ1

Culture col. no.: DSM 111728, JCM 33616

Strain history: <- T. Itoh, JCM; MJ1 <- A. Ogasawara

NCBI tax ID(s): 2586965 (species)

SI-ID 404541

DSM 111728

Special Collections

JCM
DSMZ

Section

Nanobdella aerobiophila MJ1 is a Gram-negative archaeon that was isolated from hot spring.

Gram-negative
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Nanobdellota*
	Class	*Nanobdellia*
	Order	*Nanobdellales*
	Family	*Nanobdellaceae*
	Genus	*Nanobdella*
	Species	**Nanobdella aerobiophila**
	Full Scientific Name (LPSN)	Nanobdella aerobiophila Kato et al. 2022

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68847]

Culture medium

SULFOLOBUS MEDIUM (DSMZ Medium 88)

[Ref.: #68847]

Culture medium growth

[Ref.: #68847]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68847]			growth	65 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %96.39

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68847]	Sample type/isolated from	hot spring
[Ref.: #68847]	Geographic location (country and/or sea, region)	Tochige, Okushiobara
[Ref.: #68847]	Country	Japan
[Ref.: #68847]	Country ISO 3 Code	JPN
[Ref.: #68847]	Continent	Asia
[Ref.: #68847]	Geographic location	36.9547°/139.7800°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Nanobdella aerobiophila MJ1	GCA_023169545	complete	GenBank ENA	2586965 tax ID	*

[Ref.: #68847]

GC-content

24.9 mol%

sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nanobdella aerobiophila MJ1 NCBI: GCA_023169545.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	70.539	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	54.493	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	85.656	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	96.39	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	69.774	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	76.204	no

Availability in culture collections External links

[Ref.: #68847]

Culture collection no.

DSM 111728, JCM 33616

[Ref.: #115749]

SI-ID 404541

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nanobdella aerobiophila gen. nov., sp. nov., a thermoacidophilic, obligate ectosymbiotic archaeon, and proposal of Nanobdellaceae fam. nov., Nanobdellales ord. nov. and Nanobdellia class. nov.	Kato S, Ogasawara A, Itoh T, Sakai HD, Shimizu M, Yuki M, Kaneko M, Takashina T, Ohkuma M	Int J Syst Evol Microbiol	10.1099/ijsem.0.005489	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68847

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 111728

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115749

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404541.1 )

* These data were automatically processed and therefore are not curated

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