Name: Haloechinothrix aidingensis DSM 109634
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169418

Type strain:

Species: Haloechinothrix aidingensis

Culture col. no.: DSM 109634, CGMCC 4.7627, CCTCC AA 2020012, YIM 98757

Strain history: <- S.-K. Tang, YIM; YIM 98757 <- S.-K. Tang, YIM; YIM 98757

NCBI tax ID(s): 2752311 (species)

Special Collections

DSMZ

Section

Haloechinothrix aidingensis DSM 109634 is a bacterium that was isolated from Soil.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Haloechinothrix*
	Species	"Haloechinothrix aidingensis"
	Full Scientific Name (LPSN)	Haloechinothrix aidingensis Yang et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Motility	no Confidence in %90.1

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68693]

Culture medium

GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159)

[Ref.: #68693]

Culture medium growth

[Ref.: #68693]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68693]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68693]	Sample type/isolated from	Soil
[Ref.: #68693]	Geographic location (country and/or sea, region)	XinJiang Province, Turpan city (42° 41' 13.5'' N, 89° 19' 51.6'' E)
[Ref.: #68693]	Country	China
[Ref.: #68693]	Country ISO 3 Code	CHN
[Ref.: #68693]	Continent	Asia
[Ref.: #68693]	Geographic location	42.6871°/89.3310°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #68693]	Haloechinothrix aidingensis strain YIM 98757 16S ribosomal RNA gene, partial sequence	MN251022	1530	GenBank ENA	2752311 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Haloechinothrix aidingensis YIM 98757	GCA_013450155	scaffold	GenBank ENA	2752311 tax ID	*
[Ref.: #66792]	Haloechinothrix sp. YIM 98757	2752311.3	wgs	PATRIC	2752311 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Haloechinothrix aidingensis YIM 98757 NCBI: GCA_013450155.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	88.424	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.446	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.468	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	51.69	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	85.657	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90.1	no

Availability in culture collections External links

[Ref.: #68693]

Culture collection no.

DSM 109634, CGMCC 4.7627, CCTCC AA 2020012, YIM 98757

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Haloechinothrix aidingensis sp. nov., an actinomycete isolated from salt lake in Xinjiang province, north-west China.	Yang L, Kou YR, Guan TW, Yin M, Liu BB, Shi YJ, Zhu WY, Tang SK	Arch Microbiol	10.1007/s00203-021-02184-y	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68693

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 109634

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Haloechinothrix aidingensis YIM 98757

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