Name: Massilia antarctica P8398
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169417

Type strain:

Species: Massilia antarctica

Strain Designation: P8398

Culture col. no.: DSM 114430, CCM 8941, LMG 32108

Strain history: <- CCM; CCM 8941 <- D. Nováková, CCM; P8398 <- I. Sedlácek, CCM; P8398

NCBI tax ID(s): 2765360 (species)

SI-ID 397701

DSM 114430

Special Collections

DSMZ

Section

Massilia antarctica P8398 is a Gram-negative bacterium that was isolated from water, brook.

Gram-negative
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Oxalobacteraceae*
	Genus	*Massilia*
	Species	**Massilia antarctica**
	Full Scientific Name (LPSN)	Massilia antarctica Sedlá?ek et al. 2022

Synonym

Mokoshia antarctica

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %97.982

Multimedia content

[Ref.: #68691]

Caption:

DSM 114430 on medium 830 at 15 °C

[Ref.: #68691]

Intellectual property rights:

Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68691]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #68691]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

[Ref.: #68691]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

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Culture medium growth

[Ref.: #68691]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68691]			growth	25 °C
[Ref.: #68691]			growth	15 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68691]	Sample type/isolated from	water, brook
[Ref.: #68691]	Geographic location (country and/or sea, region)	James Ross Island, Komárek valley, Glacial stream (63° 49' 51'' S, 57° 49' 48'' W)
[Ref.: #68691]	Country	Antarctica
[Ref.: #68691]	Country ISO 3 Code	ATA
[Ref.: #68691]	Continent	Australia and Oceania
[Ref.: #68691]	Geographic location	-63.8308°/-57.8300°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #124043]	Massilia sp. strain CCM 8941 16S ribosomal RNA gene, partial sequence.	OM243916	1531	GenBank ENA	2765360 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Massilia sp. CCM 8941	2765360.3	complete	PATRIC	2765360 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Massilia sp. CCM 8941 PATRIC: 2765360.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.982	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.559	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	78.219	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	87.103	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	98.991	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	83.618	no

Availability in culture collections External links

[Ref.: #68691]

Culture collection no.

DSM 114430, CCM 8941, LMG 32108

[Ref.: #115637]

SI-ID 397701

Literature:

Topic	Title	Authors	Journal	DOI	Year
Biotechnology	Characterisation of Waterborne Psychrophilic Massilia Isolates with Violacein Production and Description of Massilia antarctica sp. nov.	Sedlacek I, Holochova P, Busse HJ, Koublova V, Kralova S, Svec P, Sobotka R, Stankova E, Pilny J, Sedo O, Smolikova J, Sedlar K	Microorganisms	10.3390/microorganisms10040704	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68691

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 114430

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115637

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397701.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Massilia sp. CCM 8941

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