Name: Flavobacterium sp. JRM
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 169214

Type strain:

Species: Flavobacterium sp.

Strain Designation: JRM

Culture col. no.: DSM 105306

Strain history: <- J. Newman; Lycoming College, Williamsport, PA, USA; JRM<-J. Newman

SI-ID 400299

DSM 105306

Other strains from Flavobacterium sp.

F. sp. N2, DSM 19977
F. sp. DSM 19300, KACC 12500
F. sp. DSM 9626, ATCC 35408
F. sp. C4, DSM 425, NCIB 10150, CCUG 17935, ...
F. sp. 4214, DSM 17658
F. sp. DSM 18451
F. sp. EL-74, DSM 11468
F. sp. 19, DSM 3577, VKM B-1553
F. sp. Root901, DSM 102425
F. sp. Root935, DSM 102426
F. sp. Root186, DSM 102423
F. sp. Root420, DSM 102424
F. sp. Leaf359, DSM 102605
F. sp. Leaf82, DSM 102606
F. sp. FB7, DSM 21055
F. sp. 275, DSM 23227
F. sp. YC6718, DSM 21476
F. sp. S6-2b, DSM 22816
F. sp. TM-S1-7, DSM 26758, CGMCC 1.9702
F. sp. CCUG 49 A, LMG 12429
F. sp. CCUG 3376
F. sp. CCUG 12570
F. sp. CCUG 13387
F. sp. CCUG 17203
F. sp. CCUG 22173
F. sp. CCUG 22175
F. sp. CCUG 24997 A
F. sp. CCUG 26237
F. sp. CCUG 28481
F. sp. CCUG 28580
F. sp. CCUG 29330, LMG 12431
F. sp. CCUG 29331, LMG 12432
F. sp. CCUG 30882
F. sp. CCUG 31702
F. sp. CCUG 31954
F. sp. CCUG 32885
F. sp. CCUG 33032
F. sp. CCUG 33044
F. sp. CCUG 33072
F. sp. CCUG 33281
F. sp. CCUG 33398 A
F. sp. PB002, DSM 22791
F. sp. EC4, DSM 25358
F. sp. SIF2, DSM 25662
F. sp. ACN6, DSM 105154
F. sp. ACN2, DSM 105493
F. sp. JCM 14677
F. sp. JCM 17067
F. sp. JCM 17516, KCTC 23338
F. sp. JCM 17920
F. sp. JCM 17921
F. sp. JCM 17922
F. sp. JCM 20361, ATCC 21044, IAM 12033
F. sp. JCM 7464
F. sp. JCM 7465
F. sp. JCM 7466
F. sp. JCM 7467

Section

Flavobacterium sp. JRM is a mesophilic bacterium that was isolated from Freshwater Creek.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Full Scientific Name (LPSN)	Flavobacterium Bergey et al. 1923 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #68457]

Caption:

DSM 105306; scale bar represents 5µm

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Intellectual property rights:

Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH

Information on culture and growth conditions Culture and growth conditions

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Culture medium

R2A MEDIUM (DSMZ Medium 830)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68457]			growth	25 °C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68457]	Sample type/isolated from	Freshwater Creek
[Ref.: #68457]	Geographic location (country and/or sea, region)	Montoursville, PA
[Ref.: #68457]	Country	USA
[Ref.: #68457]	Country ISO 3 Code	USA
[Ref.: #68457]	Continent	North America
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Flavobacterium sp. JRM	GCA_000812985	contig	GenBank	1566022 tax ID	*
[Ref.: #66792]	Flavobacterium sp. JRM	1566022.4	wgs	PATRIC	1566022 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Flavobacterium sp. JRM PATRIC: 1566022.4
[Ref.: #69480]	motile	no	87.51	no
[Ref.: #69480]	gram-positive	no	98.55	no
[Ref.: #69480]	anaerobic	no	99.8	no
[Ref.: #69480]	aerobic	yes	91.821	no
[Ref.: #69480]	halophile	no	94.122	no
[Ref.: #69480]	spore-forming	no	92.578	no
[Ref.: #69480]	thermophile	no	99.697	yes
[Ref.: #69480]	glucose-util	yes	88.659	no
[Ref.: #69480]	flagellated	no	93.47	no
[Ref.: #69480]	glucose-ferment	no	89.593	no

Availability in culture collections External links

[Ref.: #68457]

Culture collection no.

DSM 105306

[Ref.: #115457]

SI-ID 400299

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68457

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105306

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115457

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400299.1 )

* These data were automatically processed and therefore are not curated

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