Flavobacterium sp. (DSM 425, NCIB 10150, CCUG 17935)

Name: Flavobacterium sp. (DSM 425, NCIB 10150, CCUG 17935)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 5514

Type strain

Strain Designation C4

Culture col. no. DSM 425 NCIB 10150 CCUG 17935 C4 Cy j1 3 more

NCBI tax ID(s) 1337839

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- H. Reichenbach; Cy j1 <- NCIB; NCIB 10150 <- D. M. Webley; C4 JCM <-- H. Oyaizu KS 0404 <-- NCIB 10150 <-- D. M. Webley C4.

Links

C4 is a bacterium that was isolated from root surface of pasture grass.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 2148

LMG 1341,ATCC 17061,DSM 2064,LMG 1340,NCIB 11054,CCUG 17935,DSM 425,NCIB 10150,CCUG 35202,NCIMB 11054,CIP 100931,CIP 101265,IAM 14304,IFO 14942,JCM 7450,NCIMB 10150,JCM 8514,VKM B-1399,CECT 5015,NBRC 14942,NCCB 96103,LMD 96.103,CFBP 3036,BCRC 14874,CCRC 14874

@ref 20215

Last LPSN update 2026-05-29 08:26:11

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Flavobacterium

Full scientific name Flavobacterium Bergey et al. 1923 (Approved Lists 1980)

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
195	CY-AGAR (DSMZ Medium 67)		Medium recipe at MediaDive	Name: CY-AGAR (DSMZ Medium 67) Composition: Agar 15.0 g/l Casitone 3.0 g/l CaCl2 x 2 H2O 1.36 g/l Yeast extract 1.0 g/l Distilled water
38791	MEDIUM 3 - Columbia agar			Columbia agar (39.000 g);distilled water (1000.000 ml)

Culture temp

@ref	Growth	Type	Temperature (°C)
195	positive	growth	30
38791	positive	growth	15
67770	positive	growth	30

Physiology and metabolism

Compound production

@ref	Compound
195	ß gluconases
195	nucleases, extracellular
195	flexirubin
195	lytic enzymes

Observation

67770

Observationquinones: MK-6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Grassland
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
195	root surface of pasture grass	Scotland	United Kingdom	GBR	Europe
46721	Root surface of pasture grass	Scotland	United Kingdom	GBR	Europe

Taxonmaps

69479

Global distribution of 16S sequence AM230488 (>99% sequence identity) for Flavobacterium from Microbeatlas

Aquatic Samples	78
Soil Samples	97
Animal Samples	70
Plant Samples	16
Total Samples	261

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Flavobacterium johnsoniae a2b 16S ribosomal RNA gene, partial sequence	AF311999	485	1337839
20218	Flavobacterium johnsoniae a5 16S ribosomal RNA gene, partial sequence	AF312000	486	1337839
20218	Flavobacterium johnsoniae a6ag 16S ribosomal RNA gene, partial sequence	AF312001	486	1337839
20218	Flavobacterium johnsoniae a20 16S ribosomal RNA gene, partial sequence	AF312002	486	1337839
20218	Flavobacterium johnsoniae a27 16S ribosomal RNA gene, partial sequence	AF312003	486	1337839
20218	Flavobacterium johnsoniae a38g 16S ribosomal RNA gene, partial sequence	AF312004	486	1337839
20218	Flavobacterium johnsoniae 16S ribosomal RNA gene, partial sequence	M59053	1516	986
195	Flavobacterium sp. DSM 425 partial 16S rRNA gene, strain DSM 425	AM230488	1501	1337839

GC content

@ref	GC-content (mol%)	Method
195	32.6
67770	32.6	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

References

#195	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 425
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38791	; Curators of the CIP;
#46721	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 17935
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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