Name: Mucisphaera calidilacus Pan265
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 169196

Type strain:

Species: Mucisphaera calidilacus

Strain Designation: Pan265

Culture col. no.: DSM 100697, CECT 30425

Strain history: <- M. Jogler, Leibniz-Institut DSMZ GmbH, Braunschweig, Germany; Pan265 <- A. Stieler, Leibniz-Institut DSMZ GmbH, Braunschweig, Germany;

NCBI tax ID(s): 2527982 (species)

SI-ID 406341

DSM 100697

Special Collections

DSMZ

Section

Mucisphaera calidilacus Pan265 is a Gram-negative bacterium that was isolated from red biofilm in a hydrothermal area.

Gram-negative
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Planctomycetota*
	Class	*Phycisphaerae*
	Order	*Phycisphaerales*
	Family	*Phycisphaeraceae*
	Genus	*Mucisphaera*
	Species	**Mucisphaera calidilacus**
	Full Scientific Name (LPSN)	Mucisphaera calidilacus Kallscheuer et al. 2022

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %94.96

Multimedia content

[Ref.: #68433]

Caption:

DSM 100697, scale bar represents 1 µm

[Ref.: #68433]

Intellectual property rights:

Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68433]

Culture medium

PLANCTOMYCES MEDIUM (DSMZ Medium 1560)

[Ref.: #68433]

Culture medium growth

[Ref.: #68433]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68433]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68433]	Sample type/isolated from	red biofilm in a hydrothermal area
[Ref.: #68433]	Geographic location (country and/or sea, region)	area in the Tyrrhenian Sea close to the Lipari Islands
[Ref.: #68433]	Country	Italy
[Ref.: #68433]	Country ISO 3 Code	ITA
[Ref.: #68433]	Continent	Europe
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mucisphaera calidilacus Pan265	GCA_007748075	complete	GenBank ENA	2527982 tax ID	*

[Ref.: #68433]

GC-content

63.9 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mucisphaera calidilacus Pan265 NCBI: GCA_007748075.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	94.96	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	68.39	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	55.418	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	84.123	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	82.832	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	56.289	no

Availability in culture collections External links

[Ref.: #68433]

Culture collection no.

DSM 100697, CECT 30425

[Ref.: #115442]

SI-ID 406341

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mucisphaera calidilacus gen. nov., sp. nov., a novel planctomycete of the class Phycisphaerae isolated in the shallow sea hydrothermal system of the Lipari Islands.	Kallscheuer N, Jogler C, Peeters SH, Boedeker C, Jogler M, Heuer A, Jetten MSM, Rohde M, Wiegand S	Antonie Van Leeuwenhoek	10.1007/s10482-021-01707-3	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68433

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100697

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115442

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406341.1 )

* These data were automatically processed and therefore are not curated

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