Name: Amycolatopsis dendrobii DR6-1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 167497

Type strain:

Species: Amycolatopsis dendrobii

Strain Designation: DR6-1

Culture col. no.: KCTC 49546, TISTR 2840, JCM 33742

NCBI tax ID(s): 2760662 (species)

Special Collections

JCM
KCTC

Amycolatopsis dendrobii DR6-1 is a spore-forming bacterium of the family Pseudonocardiaceae.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Amycolatopsis*
	Species	**Amycolatopsis dendrobii**
	Full Scientific Name (LPSN)	Amycolatopsis dendrobii Tedsree et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Motility	no Confidence in %90.1

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Amycolatopsis sp. DR6-1 gene for 16S rRNA, partial sequence	LC575120	1404	GenBank ENA	2760662 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Amycolatopsis dendrobii DR6-1	GCA_014145675	contig	GenBank ENA	2760662 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Amycolatopsis dendrobii DR6-1 NCBI: GCA_014145675.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	85.888	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.432	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.915	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	83.336	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90.1	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

KCTC 49546, TISTR 2840, JCM 33742

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Amycolatopsis dendrobii sp. nov., an endophytic actinomycete isolated from Dendrobium heterocarpum Lindl.	Tedsree N, Tanasupawat S, Sritularak B, Kuncharoen N, Likhitwitayawuid K	Int J Syst Evol Microbiol	10.1099/ijsem.0.004902	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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