Name: Acinetobacter stercoris KPC-SM-21
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 167144

Type strain:

Species: Acinetobacter stercoris

Strain Designation: KPC-SM-21

Culture col. no.: DSM 102168, LMG 29413, CIP 111016

Strain history: CIP <- 2016, P. Kämpfer, Giessen Univ., Giessen, Germany: strain KPC-SM-21

NCBI tax ID(s): 2126983 (species)

SI-ID 399214

DSM 102168

Section

Acinetobacter stercoris KPC-SM-21 is a mesophilic, Gram-negative, rod-shaped bacterium that was isolated from Environment, Digestate of a storage tank of a mesophilic German biogas plant.

Gram-negative
rod-shaped
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Species	**Acinetobacter stercoris**
	Full Scientific Name (LPSN)	Acinetobacter stercoris Pulami et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #123312]	Gram stain	negative

[Ref.: #123312]	Cell shape	rod-shaped

[Ref.: #123312]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68758]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #68758]

Culture medium growth

[Ref.: #68758]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #123312]

Culture medium

CIP Medium 72

[Ref.: #123312]

Culture medium growth

[Ref.: #123312]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68758]			growth	30 °C

[Ref.: #68758]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #123312]	Sample type/isolated from	Environment, Digestate of a storage tank of a mesophilic German biogas plant
[Ref.: #123312]	Geographic location (country and/or sea, region)	Giessen, Hessen
[Ref.: #123312]	Country	Germany
[Ref.: #123312]	Country ISO 3 Code	DEU
[Ref.: #123312]	Continent	Europe
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence MT138756 (>99% sequence identity) for Acinetobacter from Microbeatlas

Aquatic Samples	52
Soil Samples	57
Animal Samples	118
Plant Samples	5
Total Samples	232

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #123312]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Acinetobacter stercoris strain KPC-SM-21 16S ribosomal RNA gene, partial sequence	MT138756	1439	ENA	2126983 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acinetobacter stercoris KPC-SM-21	GCA_900323515	contig	GenBank	2126983 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acinetobacter stercoris KPC-SM-21 NCBI: GCA_900323515.1
[Ref.: #69480]	flagellated	no	95.455	no
[Ref.: #69480]	gram-positive	no	97.383	no
[Ref.: #69480]	anaerobic	no	98.628	no
[Ref.: #69480]	aerobic	yes	92.573	no
[Ref.: #69480]	halophile	no	90.741	no
[Ref.: #69480]	spore-forming	no	96.511	no
[Ref.: #69480]	thermophile	no	99.762	yes
[Ref.: #69480]	glucose-util	no	77.654	no
[Ref.: #69480]	motile	no	91.334	no
[Ref.: #69480]	glucose-ferment	no	87.552	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

DSM 102168, LMG 29413, CIP 111016

[Ref.: #114901]

SI-ID 399214

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Acinetobacter stercoris sp. nov. isolated from output source of a mesophilic german biogas plant with anaerobic operating conditions.	Pulami D, Schauss T, Eisenberg T, Blom J, Schwengers O, Bender JK, Wilharm G, Kampfer P, Glaeser SP	Antonie Van Leeuwenhoek	10.1007/s10482-021-01517-7	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68758

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102168

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#114901

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399214.1 )

#123312 Collection of Institut Pasteur ; Curators of the CIP; CIP 111016
* These data were automatically processed and therefore are not curated

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