Name: Muricauda hymeniacidonis 176CP4-71
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 166284

Type strain:

Species: Muricauda hymeniacidonis

Strain Designation: 176CP4-71

Culture col. no.: KACC 19889, LMG 31033

NCBI tax ID(s): 2517819 (species)

Special Collections

Literature strains

Section

Muricauda hymeniacidonis 176CP4-71 is an obligate aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from sponge .

colony-forming
Gram-negative
rod-shaped
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	Muricauda
	Species	Muricauda hymeniacidonis
	Full Scientific Name (LPSN)	Muricauda hymeniacidonis Park 2019

Synonym

Allomuricauda hymeniacidonis

Information on morphological and physiological properties Morphology

[Ref.: #68236]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %98

[Ref.: #68236]	Cell length	1.7-2.5 µm

[Ref.: #68236]	Cell width	0.4-0.8 µm

[Ref.: #68236]	Cell shape	rod-shaped

[Ref.: #68236]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %92.167

[Ref.: #68236]	Colony color	orange
[Ref.: #68236]	Colony shape	circular
[Ref.: #68236]	Cultivation medium used	Marine agar (MA)

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #68236]			growth	15-35 °C
[Ref.: #68236]			optimum	30 °C

	pH	Kind of pH		pH
[Ref.: #68236]			optimum	7
[Ref.: #68236]			growth	6-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #68236]

Oxygen tolerance

obligate aerobe

[Ref.: #68236]	Ability of spore formation	no
[Ref.: #69480]	Ability of spore formation	no Confidence in %92.83

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #68236]		NaCl		growth	1-8	%(w/v)
[Ref.: #68236]		NaCl		optimum	3	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68236]	3-hydroxybutyrate ChEBI	-	assimilation
[Ref.: #68236]	4-hydroxybenzoate ChEBI	-	assimilation
[Ref.: #68236]	5-dehydro-D-gluconate ChEBI	-	assimilation
[Ref.: #68236]	adipate ChEBI	-	assimilation
[Ref.: #68236]	casein	-	hydrolysis
[Ref.: #68236]	cellulose ChEBI	-	hydrolysis
[Ref.: #68236]	citrate ChEBI	-	assimilation
[Ref.: #68236]	D-mannitol ChEBI	-	assimilation
[Ref.: #68236]	dna ChEBI	-	hydrolysis
[Ref.: #68236]	hexanoate ChEBI	-	assimilation
[Ref.: #68236]	itaconate ChEBI	-	assimilation
[Ref.: #68236]	L-alanine ChEBI	-	assimilation
[Ref.: #68236]	L-histidine ChEBI	-	assimilation
[Ref.: #68236]	L-rhamnose ChEBI	-	assimilation
[Ref.: #68236]	lactate ChEBI	-	assimilation
[Ref.: #68236]	malonate ChEBI	-	assimilation
[Ref.: #68236]	maltose ChEBI	+	assimilation
[Ref.: #68236]	nitrate ChEBI	-	reduction
[Ref.: #68236]	phenylacetate ChEBI	-	assimilation
[Ref.: #68236]	starch ChEBI	-	hydrolysis
[Ref.: #68236]	suberate ChEBI	-	assimilation
[Ref.: #68236]	tween 60 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68236]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68236]	alkaline phosphatase	+	3.1.3.1
[Ref.: #68236]	alpha-fucosidase	-	3.2.1.51
[Ref.: #68236]	alpha-glucosidase	+	3.2.1.20
[Ref.: #68236]	arginine dihydrolase	-	3.5.3.6
[Ref.: #68236]	beta-glucosidase	+	3.2.1.21
[Ref.: #68236]	beta-glucuronidase	-	3.2.1.31
[Ref.: #68236]	catalase	+	1.11.1.6
[Ref.: #68236]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68236]	esterase (C 4)	+
[Ref.: #68236]	esterase Lipase (C 8)	+
[Ref.: #68236]	leucine arylamidase	+	3.4.11.1
[Ref.: #68236]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #68236]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #68236]	trypsin	+	3.4.21.4
[Ref.: #68236]	urease	-	3.5.1.5
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #68236]

Fatty acid	Percentage
C15:0 iso	36.6
C15:1 iso G	22.3
C17:0 iso 3OH	22.1
C16:1 w7c/C16:1 w6c	8.8
C15:0 iso 3OH	4.9
C15:0 anteiso	1.4
C16:0 iso 3OH	1.1
C16:0	0.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68236]	Sample type/isolated from	sponge (Hymeniacidon sinapium)
[Ref.: #68236]	Geographic location (country and/or sea, region)	Cheongpo beach, Taean-gun, Chungcheongnam-do
[Ref.: #68236]	Country	Republic of Korea
[Ref.: #68236]	Country ISO 3 Code	KOR
[Ref.: #68236]	Continent	Asia
[Ref.: #68236]	Geographic location	36.6333°/126.2990°
[Ref.: #68236]	Enrichment culture	MA
[Ref.: #68236]	Enrichment culture duration	1 week
[Ref.: #68236]	Enrichment culture temperature	30 ̊C
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #68236]	Muricauda hymeniacidonis strain 176CP4-71 16S ribosomal RNA gene, partial sequence	MK040414	1494	GenBank ENA	2517819 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #68236]	Allomuricauda hymeniacidonis 176CP4-71	GCA_004296335	scaffold	GenBank ENA	2517819 tax ID

[Ref.: #68236]

GC-content

41.6 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Muricauda hymeniacidonis 176CP4-71 NCBI: GCA_004296335.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.179	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	85.688	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	92.83	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.531	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	92.167	no

Availability in culture collections External links

[Ref.: #68236]

Culture collection no.

KACC 19889, LMG 31033

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Muricauda hymeniacidonis sp. nov., isolated from sponge of Hymeniacidon sinapium.	Park JS	Int J Syst Evol Microbiol	10.1099/ijsem.0.003683	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#68236

Jin-Sook Park: Muricauda hymeniacidonis sp. nov., isolated from sponge of Hymeniacidon sinapium. IJSEM 69: 3800 - 3805 2019 ( DOI 10.1099/ijsem.0.003683 )

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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