Nonomuraea roseola VNII Genetica S-445 is a mesophilic, Gram-positive, filament-shaped prokaryote that builds an aerial mycelium and was isolated from soil.
Gram-positive filament-shaped mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Streptosporangiales |
| Family Streptosporangiaceae |
| Genus Nonomuraea |
| Species Nonomuraea roseola |
| Full scientific name Nonomuraea roseola corrig. (Lavrova and Preobrazhenskaya 1975) Zhang et al. 1998 |
| Synonyms (3) |
| BacDive ID | Other strains from Nonomuraea roseola (3) | Type strain |
|---|---|---|
| 16542 | N. roseola 483-254, DSM 43551, IMET 9564 | |
| 16543 | N. roseola 485-7, DSM 43552, IMET 9565 | |
| 128587 | N. roseola STH00343(ZIMET), 71003, 21094, ST 25480, ... |
| @ref | Gram stain | Cell shape | Motility | |
|---|---|---|---|---|
| 122258 | positive | filament-shaped |
| @ref: | 11055 |
| multimedia content: | DSM_43767-1.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43767-1.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 11055 |
| multimedia content: | DSM_43767.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43767.jpg |
| caption: | Medium 65 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 19952 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19952 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 19952 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19952 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19952 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19952 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 36127 | MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum | Distilled water make up to (1000.000 ml);Agar (15.000 g);Glucose (4.000g);Yeast extract (4.000 g);Malt extract (10.000 g);Calcium carbonate (2.000 g) | |||
| 11055 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | Medium recipe at MediaDive | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water | ||
| 11055 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 122258 | CIP Medium 57 | Medium recipe at CIP |
| 67770 | Observationquinones: MK-9(H4), MK-9(H6), MK-9(H4), MK-9(H2), MK-9(H6) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 19952 | 22599 ChEBI | arabinose | - | ||
| 68368 | 29016 ChEBI | arginine | + | hydrolysis | from API 20E |
| 19952 | 62968 ChEBI | cellulose | - | ||
| 122258 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | + | assimilation | from API 20E |
| 122258 | 4853 ChEBI | esculin | + | hydrolysis | |
| 19952 | 28757 ChEBI | fructose | - | ||
| 68368 | 5291 ChEBI | gelatin | + | hydrolysis | from API 20E |
| 19952 | 17234 ChEBI | glucose | + | ||
| 122258 | 17234 ChEBI | glucose | - | degradation | |
| 68368 | 25094 ChEBI | lysine | + | degradation | from API 20E |
| 19952 | 29864 ChEBI | mannitol | - | ||
| 19952 | 17268 ChEBI | myo-inositol | + | ||
| 122258 | 17632 ChEBI | nitrate | - | reduction | |
| 122258 | 17632 ChEBI | nitrate | - | respiration | |
| 122258 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | + | degradation | from API 20E |
| 19952 | 16634 ChEBI | raffinose | - | ||
| 19952 | 26546 ChEBI | rhamnose | + | ||
| 19952 | 17992 ChEBI | sucrose | + | ||
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| 19952 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 122258 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 122258 | amylase | - | ||
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 122258 | caseinase | - | 3.4.21.50 | |
| 122258 | catalase | + | 1.11.1.6 | |
| 122258 | DNase | - | ||
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 122258 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 122258 | gelatinase | - | ||
| 68368 | gelatinase | + | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 122258 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | + | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 122258 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 122258 | oxidase | - | ||
| 122258 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 122258 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 122258 | tween esterase | - | ||
| 122258 | urease | - | 3.5.1.5 | |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| 11055 | Sample typesoil |
Global distribution of 16S sequence AJ278221 (>99% sequence identity) for Nonomuraea from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|
| 124043 | ASM3953539v1 assembly for Nonomuraea roseola JCM 3323 | scaffold | 46179 | 55.82 | ||
| 124043 | ASM4242854v1 assembly for Nonomuraea roseola JCM 3323 | scaffold | 46179 | 47.4 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Microtetraspora roseola strain ATCC33579 16S ribosomal RNA gene, partial sequence | AF051392 | 195 | 46179 | ||
| 20218 | Nonomuraea roseola 16S rRNA gene, strain DSM 43767T | AJ278221 | 1447 | 46179 | ||
| 20218 | Microtetraspora roseola 16S rRNA gene | U48980 | 1414 | 46179 | ||
| 124043 | Nonomuraea roseola strain JCM 3323 16S ribosomal RNA gene, partial sequence. | MT760448 | 1300 | 46179 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Whole genome-based reclassification of several species of the genus Nonomuraea. | Bouras N, Nouioui I, Dif G, Chaouch FC, Ebada SS. | PLoS One | 10.1371/journal.pone.0327003 | 2025 | |
| Phylogeny | Nonomuraea mangrovi sp. nov., an actinomycete isolated from mangrove soil. | Huang H, Liu M, Zhong W, Mo K, Zhu J, Zou X, Hu Y, Bao S | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002954 | 2018 | |
| Phylogeny | Nonomuraea stahlianthi sp. nov., an endophytic actinomycete isolated from the stem of Stahlianthus campanulatus. | Niemhom N, Chutrakul C, Suriyachadkun C, Thawai C | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002045 | 2017 | |
| Phylogeny | Nonomuraea dietzii sp. nov.. | Stackebrandt E, Wink J, Steiner U, Kroppenstedt RM | Int J Syst Evol Microbiol | 10.1099/00207713-51-4-1437 | 2001 |
| #11055 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43767 |
| #19952 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #36127 | ; Curators of the CIP; |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #122258 | Collection of Institut Pasteur ; Curators of the CIP; CIP 107360 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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