Cite this strain

Pasteurella sp. (JCM 5838)

Name: Pasteurella sp. (JCM 5838)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 165306

Type strain

Culture col. no. JCM 5838

NCBI tax ID(s) 759

Special Collections JCM

Links

JCM 5838 is a mesophilic prokaryote of the family Pasteurellaceae.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 131165

JCM 5838

@ref 20215

Last LPSN update 2025-12-16 10:09:38

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pasteurellales

Family Pasteurellaceae

Genus Pasteurella

Full scientific name Pasteurella Trevisan 1887 (Approved Lists 1980)

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	37	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence LC462157 (>99% sequence identity) for Pasteurella dagmatis subclade from Microbeatlas

Aquatic Samples	26
Soil Samples	4
Animal Samples	1939
Plant Samples	6
Total Samples	1975

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Pasteurella sp. JCM 5838 gene for 16S ribosomal RNA, partial sequence	LC462157	1464		759

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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