Name: Fusobacterium varium JCM 3722
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 164786

Type strain:

Species: Fusobacterium varium

Culture col. no.: JCM 3722, ATCC 51644, KCTC 15083

Strain history: T. Shinjo Fn 521 (Biovar C) <-- H. Beerens 118.

NCBI tax ID(s): 856 (species)

SI-ID 45308

ATCC 51644, JCM 3722

Special Collections

JCM
KCTC

Other strains from Fusobacterium varium

Section

Fusobacterium varium JCM 3722 is a bacterium that was isolated from Ovine pulmonary abscess.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Fusobacteriota*
	Class	*Fusobacteriia*
	Order	*Fusobacteriales*
	Family	*Fusobacteriaceae*
	Genus	*Fusobacterium*
	Species	**Fusobacterium varium**
	Full Scientific Name (LPSN)	Fusobacterium varium (Eggerth and Gagnon 1933) Moore and Holdeman 1969 (Approved Lists 1980)

	Synonym	Fusobacterium pseudonecrophorum
	Synonym	"Bacteroides* varius"*

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Ovine pulmonary abscess
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB595132 (>99% sequence identity) for Fusobacterium from Microbeatlas

Aquatic Samples	2796
Soil Samples	1169
Animal Samples	50429
Plant Samples	432
Total Samples	54826

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Fusobacterium varium gene for 16S ribosomal RNA, partial sequence, strain: JCM 3722	AB595132	1457	GenBank ENA	856 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 3722, ATCC 51644, KCTC 15083

[Ref.: #114217]

SI-ID 45308

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Stimulation of epithelial cell matrix metalloproteinase (MMP-2, -9, -13) and interleukin-8 secretion by fusobacteria.	Gursoy UK, Kononen E, Uitto VJ	Oral Microbiol Immunol	10.1111/j.1399-302X.2008.00453.x	2008	*
Phylogeny	Recognition of biovar C of Fusobacterium necrophorum (Flugge) Moore and Holdeman as Fusobacterium pseudonecrophorum sp. nov., nom. rev. (ex Prevot 1940).	Shinjo T, Hiraiwa K, Miyazato S	Int J Syst Bacteriol	10.1099/00207713-40-1-71	1990	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#114217

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID45308.1 )

* These data were automatically processed and therefore are not curated

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