Name: Limnobaculum zhutongyuii JCM 33489
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 164583

Type strain:

Species: Limnobaculum zhutongyuii

Culture col. no.: JCM 33489, CGMCC 1.16483, GDMCC 1.1586

Strain history: J. Yang; Natl. Inst. for Commun. Dis. Control & Prev., China CDC, China; CF-458.

NCBI tax ID(s): 2498113 (species)

Special Collections

Section

Limnobaculum zhutongyuii JCM 33489 is a mesophilic bacterium that was isolated from Cloacal contents of snow finches .

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Limnobaculum*
	Species	**Limnobaculum zhutongyuii**
	Full Scientific Name (LPSN)	Limnobaculum zhutongyuii (Ge et al. 2021) Li et al. 2023

Synonym

Jinshanibacter zhutongyuii

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Cloacal contents of snow finches (Montifringilla taczanowskii)
[Ref.: #67770]	Host species	Montifringilla taczanowskii
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence MK312470 (>99% sequence identity) for Jinshanibacter zhutongyuii subclade from Microbeatlas

Aquatic Samples	215
Soil Samples	135
Animal Samples	1293
Plant Samples	82
Total Samples	1725

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Limnobaculum zhutongyuii strain CF-458 16S ribosomal RNA gene, partial sequence	MK312470	1504	GenBank ENA	2498113 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Jinshanibacter zhutongyuii CF-458	GCA_004295645	complete	GenBank ENA	2498113 tax ID

[Ref.: #67770]

GC-content

45.7 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33489, CGMCC 1.16483, GDMCC 1.1586

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Jinshanibacter, a new genus of Budviciaceae: identification of Jinshanibacter zhutongyuii sp. nov. and Jinshanibacter xujianqingii sp. nov. isolated from cloacal content of snow finch (Montifringilla taczanowskii).	Ge Y, Wang B, Yang J, Lai XH, Zhang G, Lu S, Jin D, Huang Y, Cheng Y, Zhang X, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004653	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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