Name: Limnobaculum xujianqingii JCM 33490
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164584

Type strain:

Species: Limnobaculum xujianqingii

Culture col. no.: JCM 33490, CGMCC 1.16786, GDMCC 1.1587

Strain history: J. Yang; Natl. Inst. for Commun. Dis. Control & Prev., China CDC, China; CF-1111.

NCBI tax ID(s): 2738837 (species)

Section

Limnobaculum xujianqingii JCM 33490 is a mesophilic bacterium that was isolated from Cloacal contents of snow finches .

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Enterobacteriaceae*
	Genus	*Limnobaculum*
	Species	**Limnobaculum xujianqingii**
	Full Scientific Name (LPSN)	Limnobaculum xujianqingii (Ge et al. 2021) Li et al. 2023

	Synonym	Insectihabitans xujianqingii
	Synonym	Jinshanibacter xujianqingii

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Cloacal contents of snow finches (Montifringilla taczanowskii)
[Ref.: #67770]	Host species	Montifringilla taczanowskii
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pragia sp. strain CF-1111 16S ribosomal RNA gene, partial sequence	MK635060	1504	ENA	2738837 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Insectihabitans xujianqingii CF-1111	GCA_013394855	contig	GenBank	2738837 tax ID

[Ref.: #67770]

GC-content

45.4 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Insectihabitans xujianqingii CF-1111 NCBI: GCA_013394855.1
[Ref.: #69480]	motile	no	68.567	no
[Ref.: #69480]	flagellated	no	93.991	no
[Ref.: #69480]	gram-positive	no	97.848	no
[Ref.: #69480]	anaerobic	no	92.428	no
[Ref.: #69480]	aerobic	no	52.766	no
[Ref.: #69480]	halophile	no	90.7	no
[Ref.: #69480]	spore-forming	no	95.624	no
[Ref.: #69480]	glucose-util	yes	89.257	no
[Ref.: #69480]	glucose-ferment	yes	83.356	no
[Ref.: #69480]	thermophile	no	99.469	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33490, CGMCC 1.16786, GDMCC 1.1587

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Search for species Jinshanibacter xujianqingii in external resources:
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Insectihabitans xujianqingii CF-1111

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