Name: Fusobacterium pseudoperiodonticum JCM 33009
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164435

Type strain:

Species: Fusobacterium pseudoperiodonticum

Culture col. no.: JCM 33009, KCOM 1259, KCTC 5677

Strain history: J.-K. Kook; KCOM, Chosun Univ., South Korea; ChDC F213.

NCBI tax ID(s): 2663009 (species)

Section

Fusobacterium pseudoperiodonticum JCM 33009 is a mesophilic bacterium that was isolated from Tongue of a Korean male subjects with gingivitis.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Fusobacteriota*
	Class	*Fusobacteriia*
	Order	*Fusobacteriales*
	Family	*Fusobacteriaceae*
	Genus	*Fusobacterium*
	Species	"Fusobacterium pseudoperiodonticum"
	Full Scientific Name (LPSN)	Fusobacterium pseudoperiodonticum Park et al. 2019

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Tongue of a Korean male subjects with gingivitis
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence FJ471665 (>99% sequence identity) for Fusobacterium from Microbeatlas

Aquatic Samples	511
Soil Samples	483
Animal Samples	38777
Plant Samples	231
Total Samples	40002

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Fusobacterium periodonticum strain ChDC F213 16S ribosomal RNA gene, partial sequence	FJ471665	1428	ENA	2663009 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Fusobacterium pseudoperiodonticum KCOM 1259	GCA_002761955	contig	GenBank	2663009 tax ID

[Ref.: #67770]

GC-content

28 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Fusobacterium pseudoperiodonticum KCOM 1259 NCBI: GCA_002761955.1
[Ref.: #69480]	flagellated	no	95.047	no
[Ref.: #69480]	gram-positive	no	90.515	no
[Ref.: #69480]	anaerobic	yes	99.713	no
[Ref.: #69480]	aerobic	no	98.804	no
[Ref.: #69480]	halophile	no	77.463	no
[Ref.: #69480]	spore-forming	no	90.995	no
[Ref.: #69480]	thermophile	no	98.197	no
[Ref.: #69480]	glucose-util	yes	81.244	no
[Ref.: #69480]	motile	no	93.019	no
[Ref.: #69480]	glucose-ferment	yes	60.719	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 33009, KCOM 1259, KCTC 5677

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Fusobacterium pseudoperiodonticum sp. nov., Isolated from the Human Oral Cavity.	Park SN, Lim YK, Shin JH, Kim HS, Jo E, Lee WP, Shin Y, Paek J, Chang YH, Kim H, Kook JK	Curr Microbiol	10.1007/s00284-019-01675-y	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Fusobacterium pseudoperiodonticum KCOM 1259

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