Name: Flagellimonas algicola JCM 32942
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164419

Type strain:

Species: Flagellimonas algicola

Culture col. no.: JCM 32942, KACC 19790, AST 0115

Strain history: C. O. Jeon; Chung-Ang Univ., South Korea; AsT0115.

NCBI tax ID(s): 2583815 (species)

Section

Flagellimonas algicola JCM 32942 is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and has a yellow pigmentation.

colony-forming
Gram-negative
pigmented
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flagellimonas*
	Species	**Flagellimonas algicola**
	Full Scientific Name (LPSN)	Flagellimonas algicola Kim et al. 2020

	Synonym	Allomuricauda algicola
	Synonym	Muricauda algicola

Information on morphological and physiological properties Morphology

[Ref.: #68058]	Gram stain	negative

[Ref.: #68058]	Cell shape	rod-shaped

[Ref.: #68058]	Motility	no

[Ref.: #68058]	Colony color	yellow
[Ref.: #68058]	Colony shape	circular
[Ref.: #68058]	Cultivation medium used	Marine agar (MA)

[Ref.: #68058]	Pigment production	yes
[Ref.: #68058]	Pigmentation color	yellow
[Ref.: #68058]	Pigment name	non-diffusible

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #67770]	growth	25 °C
[Ref.: #68058]	growth	15-37 °C
[Ref.: #68058]	optimum	25 °C

[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #68058]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #68058]			optimum	7
[Ref.: #68058]			growth	6.5-7.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #68058]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #68058]		NaCl		growth	0.0-11.0	%(w/v)
[Ref.: #68058]		NaCl		optimum	2.0-3.0	%(w/v)

[Ref.: #67770]	Observation	quinones: MK-6
[Ref.: #68058]	Observation	MK-6 is detected as the only isoprenoid quinone
[Ref.: #68058]	Observation	Phosphatidylethanolamine, one identified aminolipid, and three unidentified polar lipids are identified

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68058]	adipate ChEBI	-	assimilation
[Ref.: #68058]	casein	+	hydrolysis
[Ref.: #68058]	D-glucose ChEBI	+	assimilation
[Ref.: #68058]	D-mannitol ChEBI	+	assimilation
[Ref.: #68058]	D-mannose ChEBI	-	assimilation
[Ref.: #68058]	esculin ChEBI	+	hydrolysis
[Ref.: #68058]	gelatin ChEBI	-	hydrolysis
[Ref.: #68058]	glucose ChEBI	-	fermentation
[Ref.: #68058]	hexanoate ChEBI	+	assimilation
[Ref.: #68058]	L-arabinose ChEBI	-	assimilation
[Ref.: #68058]	malate ChEBI	-	assimilation
[Ref.: #68058]	maltose ChEBI	-	assimilation
[Ref.: #68058]	N-acetyl-D-glucosamine ChEBI	+	assimilation
[Ref.: #68058]	nitrate ChEBI	+	reduction
[Ref.: #68058]	phenylacetate ChEBI	-	assimilation
[Ref.: #68058]	potassium gluconate ChEBI	-	assimilation
[Ref.: #68058]	sodium citrate ChEBI	-	assimilation
[Ref.: #68058]	starch ChEBI	-	hydrolysis
[Ref.: #68058]	tween 20 ChEBI	-	hydrolysis
[Ref.: #68058]	tween 80 ChEBI	-	hydrolysis
[Ref.: #68058]	tyrosine ChEBI	+	hydrolysis
[Ref.: #68058]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68058]		indole ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #68058]	acid phosphatase	+	3.1.3.2
[Ref.: #68058]	alkaline phosphatase	+	3.1.3.1
[Ref.: #68058]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #68058]	alpha-fucosidase	-	3.2.1.51
[Ref.: #68058]	alpha-galactosidase	-	3.2.1.22
[Ref.: #68058]	alpha-glucosidase	-	3.2.1.20
[Ref.: #68058]	alpha-mannosidase	-	3.2.1.24
[Ref.: #68058]	beta-galactosidase	+	3.2.1.23
[Ref.: #68058]	beta-glucosidase	-	3.2.1.21
[Ref.: #68058]	beta-glucuronidase	-	3.2.1.31
[Ref.: #68058]	catalase	-	1.11.1.6
[Ref.: #68058]	cystine arylamidase	-	3.4.11.3
[Ref.: #68058]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68058]	esterase (C 4)	-
[Ref.: #68058]	esterase Lipase (C 8)	-
[Ref.: #68058]	leucine arylamidase	+	3.4.11.1
[Ref.: #68058]	lipase (C 14)	-
[Ref.: #68058]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #68058]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #68058]	trypsin	-	3.4.21.4
[Ref.: #68058]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #68058]

Fatty acid	Percentage
C15:0 iso	56.5
C15:1 iso G	28.6
C16:0	5.2
C15:0 anteiso	3.2
C13:0 iso	2.2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Red marine alga, Asparagopsis taxiformis
[Ref.: #67770]	Host species	Asparagopsis taxiformis
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yellow Sea

[Ref.: #68058]	Sample type/isolated from	red marine alga, Asparagopsis taxiformis
[Ref.: #68058]	Geographic location (country and/or sea, region)	Yellow (West) Sea
[Ref.: #68058]	Country	Republic of Korea
[Ref.: #68058]	Country ISO 3 Code	KOR
[Ref.: #68058]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #68058]	Flagellimonas algicola 16S ribosomal RNA gene, partial sequence	MK391377	1462	ENA	2583815 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Allomuricauda algicola AsT0115	GCA_005937185	contig	GenBank	2583815 tax ID

[Ref.: #68058]

GC-content

41.7 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Muricauda algicola AsT0115 NCBI: GCA_005937185.1
[Ref.: #69480]	motile	no	87.353	no
[Ref.: #69480]	flagellated	no	95.364	yes
[Ref.: #69480]	gram-positive	no	98.081	no
[Ref.: #69480]	anaerobic	no	99.308	yes
[Ref.: #69480]	aerobic	yes	85.885	yes
[Ref.: #69480]	halophile	no	77.682	no
[Ref.: #69480]	spore-forming	no	95.774	no
[Ref.: #69480]	thermophile	no	98.651	yes
[Ref.: #69480]	glucose-util	yes	88.325	yes
[Ref.: #69480]	glucose-ferment	no	89.917	yes

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 32942, KACC 19790, AST 0115

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68058

Jungeun Kim, Kyung Hyun Kim, Byung Hee Chun, Shehzad Abid Khan, Che Ok Jeon: Flagellimonas algicola sp. nov., Isolated from a Marine Red Alga, Asparagopsis taxiformis. Arch Microbiol 77: 294 - 299 2020 ( DOI 10.1007/s00284-019-01821-6 )

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Muricauda algicola AsT0115

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