Maribacter algicola (KACC 19789, JCM 32941, PoM-212)

Name: Maribacter algicola (KACC 19789, JCM 32941, PoM-212)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164418

Type strain

Strain Designation PoM-212

Culture col. no. KACC 19789 JCM 32941 PoM-212

NCBI tax ID(s) 2498892

Special Collections JCM Literature strains

History JCM <-- C. O. Jeon; Dept. of Life Sci., Chung-Ang Univ., South Korea; PoM-212.

Links

Maribacter algicola PoM-212 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from Marine red alga, Porphyridium marinum.

Gram-negative motile rod-shaped colony-forming aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 133376

JCM 32941

@ref 20215

Last LPSN update 2026-05-29 08:45:24

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Maribacter

Species Maribacter algicola

Full scientific name Maribacter algicola Khan et al. 2020

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
69564	negative	rod-shaped
125439	negative		98.061
125438	negative		97.083
125438			94.5

Colony morphology

@ref	Colony color	Colony shape	Incubation period	Medium used
69564	orange	circular	3 days	Marine agar (MA)

Pigmentation

@ref	Production	Name
69564		flexirubin type pigments

Culture and growth conditions

Culture medium

@ref	Name	Growth
69564	Marine agar (MA)

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30
69564	positive	growth	20-40
69564	positive	optimum	30

Culture pH

@ref	Ability	Type	PH
69564	positive	optimum	5.0-5.5
69564	positive	growth	5.0-8.5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
69564	aerobe
125438	aerobe	90.758

Spore formation

@ref	Spore formation	Confidence
125438		91.333
125439		99.159

Halophily

@ref	Salt	Growth	Tested relation	Concentration
69564	NaCl	positive	growth	0.5-5 %(w/v)
69564	NaCl	positive	optimum	2-3 %(w/v)

Observation

@ref	Observation
67770	quinones: MK-6
69564	The colonies are orange colour, circular, smooth, entire and convex.
69564	The Cells are gliding motility, but no flagellum is observed.
69564	Phosphatidylethanolamine, three unidentified aminolipids and two unidentified polar lipids are detected as major polar lipids.

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
69564	17128 ChEBI	adipate	-	assimilation
69564		casein	-	hydrolysis
69564	17634 ChEBI	D-glucose	-	assimilation
69564	16899 ChEBI	D-mannitol	-	assimilation
69564	16024 ChEBI	D-mannose	-	assimilation
69564	27689 ChEBI	decanoate	-	assimilation
69564	4853 ChEBI	esculin	+	hydrolysis
69564	17234 ChEBI	glucose	-	fermentation
69564	35581 ChEBI	indole	-	assimilation
69564	30849 ChEBI	L-arabinose	-	assimilation
69564	25115 ChEBI	malate	-	assimilation
69564	17306 ChEBI	maltose	-	assimilation
69564	506227 ChEBI	N-acetyl-D-glucosamine	-	assimilation
69564	17632 ChEBI	nitrate	-	reduction
69564	18401 ChEBI	phenylacetate	-	assimilation
69564	32032 ChEBI	potassium gluconate	-	assimilation
69564	53258 ChEBI	sodium citrate	+	assimilation
69564	28017 ChEBI	starch	-	hydrolysis
69564	53424 ChEBI	tween 20	+	hydrolysis
69564	53426 ChEBI	tween 80	+	hydrolysis
69564	18186 ChEBI	tyrosine	+	hydrolysis

Metabolite production

@ref	Chebi-ID	Metabolite	Production
69564	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
69564	acid phosphatase	+	3.1.3.2
69564	alkaline phosphatase	+	3.1.3.1
69564	alpha-chymotrypsin	+	3.4.21.1
69564	alpha-fucosidase	+	3.2.1.51
69564	alpha-galactosidase	+	3.2.1.22
69564	alpha-glucosidase	+	3.2.1.20
69564	alpha-mannosidase	+	3.2.1.24
69564	arginine dihydrolase	-	3.5.3.6
69564	beta-galactosidase	+	3.2.1.23
69564	beta-glucosidase	+	3.2.1.21
69564	beta-glucuronidase	-	3.2.1.31
69564	catalase	+	1.11.1.6
69564	cystine arylamidase	+	3.4.11.3
69564	cytochrome oxidase	+	1.9.3.1
69564	esterase (C 4)	+
69564	esterase Lipase (C 8)	+
69564	gelatinase	+
69564	leucine arylamidase	+	3.4.11.1
69564	lipase (C 14)	-
69564	N-acetyl-beta-glucosaminidase	+	3.2.1.52
69564	naphthol-AS-BI-phosphohydrolase	+
69564	trypsin	+	3.4.21.4
69564	urease	-	3.5.1.5
69564	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

@ref

69564

Fatty acid	Percentage
C17:0 iso 3OH	23.5
C15:0 iso	21.5
C16:1 w7c / C16:1w6c	15.4
C15:1 iso	13.7
C16:0 10-methyl/C17:1 iso w9c	9.9
C14:0 iso 3OH	3.9
C16:0	2.9
C16:0 3OH	1.7
C14:0 iso	1.5

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Country	Country ISO 3 Code	Continent
67770	Marine red alga, Porphyridium marinum	Porphyridium marinum	Republic of Korea	KOR	Asia
69564	marine red alga, Porphyridium marinum		Republic of Korea	KOR	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM393324v1 assembly for Maribacter algicola PoM-212	contig	GCA_003933245	2498892.3	2884493326	2498892	75.73

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Maribacter sp. strain PoM-212 16S ribosomal RNA gene, partial sequence	MH742311	1460		1897614

GC content

@ref	GC-content (mol%)	Method
67770	41	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM393324v1 assembly for Maribacter algicola PoM-212
NCBI: GCA_003933245

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	98.06	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	73.64	no
125439	motility	BacteriaNetⓘ	no	82.59	no
125439	spore_formation	BacteriaNetⓘ	no	99.16	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Maribacter algicola PoM-212
NCBI: GCA_003933245.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.08	no
125438	anaerobic	anaerobicⓘ	no	97.97	yes
125438	aerobic	aerobicⓘ	yes	90.76	yes
125438	spore-forming	spore-formingⓘ	no	91.33	no
125438	thermophilic	thermophileⓘ	no	98.68	no
125438	flagellated	motile2+ⓘ	no	94.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum, and transfer of Maripseudobacter aurantiacus Chen et al. 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov.	Khan SA, Jeong SE, Baek JH, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijsem.0.003828	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69564	Shehzad Abid Khan, Sang Eun Jeong, Ju Hye Baek and Che Ok Jeon: Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum, and transfer of Maripseudobacter aurantiacus Chen et al. 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov.. IJSEM 70: 2019 ( DOI 10.1099/ijsem.0.003828 )
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Maribacter algicola (KACC 19789, JCM 32941, PoM-212)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003933245

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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