Name: Nocardioides ungokensis JCM 32751
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 164346

Type strain:

Species: Nocardioides ungokensis

Culture col. no.: JCM 32751, KACC 18304, LMG 28591

Strain history: KACC 18304 <-- W.-T. Im; Hankyong Natl. Univ., South Korea; UKS-03.

NCBI tax ID(s): 1643322 (species)

Section

Nocardioides ungokensis JCM 32751 is a mesophilic, Gram-positive bacterium that was isolated from Soil of Ungok Lake in Gochang Province.

Gram-positive
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Propionibacteriales*
	Family	*Nocardioidaceae*
	Genus	*Nocardioides*
	Species	**Nocardioides ungokensis**
	Full Scientific Name (LPSN)	Nocardioides ungokensis Zhao et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %99.999

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.577

[Ref.: #67770]

Observation

quinones: MK-8(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil of Ungok Lake in Gochang Province
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nocardioides ungokensis strain UKS-03 16S ribosomal RNA gene, partial sequence	KP893899	1442	ENA	1643322 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Nocardioides ungokensis LMG 28591	GCA_013466985	complete	GenBank	1643322 tax ID	*
[Ref.: #66792]	Nocardioides ungokensis strain LMG 28591	1643322.3	complete	PATRIC	1643322 tax ID	*

[Ref.: #67770]

GC-content

71.9 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nocardioides ungokensis LMG 28591 NCBI: GCA_013466985.1
[Ref.: #69481]	spore-forming	no	84	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nocardioides ungokensis LMG 28591 NCBI: GCA_013466985.1
[Ref.: #69480]	flagellated	no	98.915	no
[Ref.: #69480]	gram-positive	yes	92.759	no
[Ref.: #69480]	anaerobic	no	98.968	no
[Ref.: #69480]	aerobic	yes	93.985	no
[Ref.: #69480]	halophile	no	93.906	no
[Ref.: #69480]	spore-forming	no	84.183	no
[Ref.: #69480]	thermophile	no	97.973	yes
[Ref.: #69480]	glucose-util	yes	88.29	no
[Ref.: #69480]	motile	no	97.119	no
[Ref.: #69480]	glucose-ferment	no	91.11	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 32751, KACC 18304, LMG 28591

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardioides ungokensis sp. nov., isolated from lake sediment.	Zhao Y, Liu Q, Kang MS, Jin F, Yu H, Im WT	Int J Syst Evol Microbiol	10.1099/ijsem.0.000657	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Nocardioides ungokensis LMG 28591

Nocardioides ungokensis LMG 28591

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