Name: Halorubrum depositum JCM 31272
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163998

Type strain:

Species: Halorubrum depositum

Culture col. no.: JCM 31272, CGMCC 1.15456

Strain history: S. Chen; Dept. of Biol., Sch. of Life Sci. & Technol., Honghe Univ., China; Y78.

NCBI tax ID(s): 2583992 (species)

Special Collections

Section

Halorubrum depositum JCM 31272 is an archaeon that was isolated from Salt deposit of Yunnan salt mine.

16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Halobacteria*
	Order	*Haloferacales*
	Family	*Halorubraceae*
	Genus	*Halorubrum*
	Species	**Halorubrum depositum**
	Full Scientific Name (LPSN)	Halorubrum depositum Chen et al. 2019

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Salt deposit of Yunnan salt mine
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Halorubrum sp. strain Y78 16S ribosomal RNA gene, partial sequence	KX376712	1439	GenBank ENA	1879286 tax ID

[Ref.: #67770]

GC-content

66.6 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 31272, CGMCC 1.15456

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halorubrum depositum sp. nov., a Novel Halophilic Archaeon Isolated from a Salt Deposit.	Chen S, Sun S, Xu Y, Lv J, Chen L, Liu L	Curr Microbiol	10.1007/s00284-018-1432-1	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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