Name: Paenibacillus ihbetae JCM 31131
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 163954

Type strain:

Species: Paenibacillus ihbetae

Culture col. no.: JCM 31131, KACC 19072, MCC 2795, MTCC 12459

Strain history: A. Gulati; CSIR-Inst. of Himalayan Bioresour. Technol., India; IHBB 9852.

NCBI tax ID(s): 1870820 (species)

Other strains from Paenibacillus ihbetae

P. ihbetae JCM 31132, KACC 19073, MCC 2794, ...

Section

Paenibacillus ihbetae JCM 31131 is a mesophilic bacterium that was isolated from Sediment of Suraj Tal Lake in Lahaul valley.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus ihbetae**
	Full Scientific Name (LPSN)	Paenibacillus ihbetae Kiran et al. 2020

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sediment of Suraj Tal Lake in Lahaul valley
[Ref.: #67770]	Geographic location (country and/or sea, region)	Himachal Pradesh
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KP745129 (>99% sequence identity) for Paenibacillus ihbetae from Microbeatlas

Aquatic Samples	111
Soil Samples	443
Animal Samples	206
Plant Samples	393
Total Samples	1153

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paenibacillus sp. IHB B 9852 16S ribosomal RNA gene, partial sequence	KP745129	1565	ENA	1684881 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paenibacillus ihbetae IHBB 9852	GCA_002741055	complete	GenBank	1870820 tax ID
[Ref.: #66792]	Paenibacillus ihbetae strain IHBB 9852	1870820.3	complete	PATRIC	1870820 tax ID	*

[Ref.: #67770]

GC-content

52.1 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Paenibacillus ihbetae strain IHBB 9852 PATRIC: 1870820.3
[Ref.: #69480]	motile	yes	93.229	no
[Ref.: #69480]	gram-positive	yes	85.903	no
[Ref.: #69480]	anaerobic	no	98.288	no
[Ref.: #69480]	aerobic	yes	87.934	no
[Ref.: #69480]	halophile	no	83.274	no
[Ref.: #69480]	spore-forming	yes	96.269	no
[Ref.: #69480]	glucose-util	yes	89.684	no
[Ref.: #69480]	flagellated	yes	78.151	no
[Ref.: #69480]	thermophile	no	98.743	yes
[Ref.: #69480]	glucose-ferment	no	86.308	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 31131, KACC 19072, MCC 2795, MTCC 12459

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus ihbetae sp. nov., a cold-adapted antimicrobial producing bacterium isolated from high altitude Suraj Tal Lake in the Indian trans-Himalayas.	Kiran S, Swarnkar MK, Mayilraj S, Tewari R, Gulati A	Syst Appl Microbiol	10.1016/j.syapm.2017.07.005	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Paenibacillus ihbetae strain IHBB 9852

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