Name: Flavobacterium shanxiense JCM 30153
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163722

Type strain:

Species: Flavobacterium shanxiense

Culture col. no.: JCM 30153, CCTCC AB 2014079

Strain history: H. Qing; Coll. of Life Sci., Nanjing Agric. Univ., China; YF-2.

NCBI tax ID(s): 1510192 (species)

Special Collections

Section

Flavobacterium shanxiense JCM 30153 is a bacterium that was isolated from Farmland soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	"Flavobacterium shanxiense"
	Full Scientific Name (LPSN)	Flavobacterium shanxiense Yang et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Farmland soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yuncheng City, Shanxi Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KJ641612 (>99% sequence identity) for Flavobacterium from Microbeatlas

Aquatic Samples	498
Soil Samples	51
Animal Samples	359
Plant Samples	89
Total Samples	997

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Flavobacterium shanxiense 16S ribosomal RNA gene, partial sequence	KJ641612	1475	GenBank ENA	1510192 tax ID

[Ref.: #67770]

GC-content

35.2 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 30153, CCTCC AB 2014079

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium shanxiense sp. nov., isolated from soil.	Yang F, Liu HM, Zhang R, Chen DB, Wang X, Yan X, Hong Q, Li SP	Curr Microbiol	10.1007/s00284-015-0792-z	2015	*
Phylogeny	Flavobacterium lutivivi sp. nov., isolated from activated sludge.	Feng Q, Han L, Nogi Y, Hong Q, Lv J	Int J Syst Evol Microbiol	10.1099/ijsem.0.000892	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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