Name: Chryseobacterium ginsengiterrae JCM 19896
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162659

Type strain:

Species: Chryseobacterium ginsengiterrae

Culture col. no.: JCM 19896, KCTC 32174

Strain history: D.-C. Yang and Y.-J. Kim DCY78.

NCBI tax ID(s): 1245592 (species)

Section

Chryseobacterium ginsengiterrae JCM 19896 is a mesophilic bacterium that was isolated from Soil of a ginseng field.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Weeksellaceae*
	Genus	*Chryseobacterium*
	Species	**Chryseobacterium ginsengiterrae**
	Full Scientific Name (LPSN)	Chryseobacterium ginsengiterrae Hahnke et al. 2017

Synonym

Epilithonimonas ginsengisoli

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil of a ginseng field
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yeon-cheon Province
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence JX827729 (>99% sequence identity) for Weeksellaceae from Microbeatlas

Aquatic Samples	198
Soil Samples	154
Animal Samples	631
Plant Samples	87
Total Samples	1070

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Chryseobacterium ginsengiterrae strain DCY 78 16S ribosomal RNA gene, partial sequence	JX827729	1439	ENA	1245592 tax ID

[Ref.: #67770]

GC-content

37.9 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19896, KCTC 32174

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Epilithonimonas ginsengisoli sp. nov., isolated from soil of a ginseng field.	Hoang VA, Kim YJ, Ponnuraj SP, Nguyen NL, Hwang KH, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.065466-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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