Name: Cryobacterium sp. JCM 19504
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162535

Type strain:

Species: Cryobacterium sp.

Culture col. no.: JCM 19504

Strain history: S. M. Singh MLB-32 (Cry-h).

NCBI tax ID(s): 1926290 (species)

Other strains from Cryobacterium sp.

C. sp. FB 3, DSM 21042
C. sp. C31y, DSM 22273
C. sp. JCM 19503
C. sp. JCM 19506
C. sp. Cr4-19, DSM 22799

Section

Cryobacterium sp. JCM 19504 is a psychrophilic bacterium that was isolated from Cryoconite holes of glaciers.

psychrophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Cryobacterium*
	Full Scientific Name (LPSN)	Cryobacterium Suzuki et al. 1997

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	15 °C

[Ref.: #67770]

Temperature range

psychrophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Cryoconite holes of glaciers
[Ref.: #67770]	Geographic location (country and/or sea, region)	Spitsbergen
[Ref.: #67770]	Country	Norway
[Ref.: #67770]	Country ISO 3 Code	NOR
[Ref.: #67770]	Continent	Europe
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence JX205199 (>99% sequence identity) for Cryobacterium from Microbeatlas

Aquatic Samples	1295
Soil Samples	1037
Animal Samples	250
Plant Samples	164
Total Samples	2746

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Cryobacterium psychrophilum strain MLB-32 16S ribosomal RNA gene, partial sequence	JX205199	1470	ENA	41988 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Cryobacterium sp. MLB-32	GCA_000738085	contig	GenBank	1529318 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Cryobacterium sp. MLB-32 MLB-32 NCBI: GCA_000738085.1
[Ref.: #69480]	motile	yes	81.049	no
[Ref.: #69480]	flagellated	no	91.475	no
[Ref.: #69480]	gram-positive	yes	91.695	no
[Ref.: #69480]	anaerobic	no	99.256	no
[Ref.: #69480]	aerobic	yes	93.463	no
[Ref.: #69480]	halophile	no	86.157	no
[Ref.: #69480]	spore-forming	no	84.712	no
[Ref.: #69480]	glucose-util	yes	85.121	no
[Ref.: #69480]	thermophile	no	99.32	yes
[Ref.: #69480]	glucose-ferment	no	89.679	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19504

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Search for species Cryobacterium sp. in external resources:
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PANGAEA
StrainInfo
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Cryobacterium sp. MLB-32 MLB-32

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