Name: Isoptericola rhizophila JCM 19252
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162447

Type strain:

Species: Isoptericola rhizophila

Culture col. no.: JCM 19252, MTCC 11080

Strain history: S. Mayilraj BKS3-46.

NCBI tax ID(s): 1303811 (species)

Section

Isoptericola rhizophila JCM 19252 is a mesophilic bacterium that was isolated from Soil from rhizosphere of Ficus benghalensis , Bhitarkanika mangrove forest.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Promicromonosporaceae*
	Genus	*Isoptericola*
	Species	"Isoptericola rhizophila"
	Full Scientific Name (LPSN)	Isoptericola rhizophila Kaur et al. 2014

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil from rhizosphere of Ficus benghalensis (banyan tree), Bhitarkanika mangrove forest
[Ref.: #67770]	Host species	Ficus benghalensis
[Ref.: #67770]	Geographic location (country and/or sea, region)	Odisha
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Isoptericola sp. BKS3-46 16S ribosomal RNA gene, partial sequence	KC608148	1410	ENA	1303811 tax ID

[Ref.: #67770]

GC-content

70.4 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19252, MTCC 11080

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isoptericola rhizophila sp. nov., a novel actinobacterium isolated from rhizosphere soil.	Kaur N, Rajendran MK, Kaur G, Shanmugam M	Antonie Van Leeuwenhoek	10.1007/s10482-014-0197-1	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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