Name: Hymenobacter antarcticus JCM 17216
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161972

Type strain:

Species: Hymenobacter antarcticus

Culture col. no.: JCM 17216

Strain history: J. L. Klassen and J. M. Foght VUG-A34.

NCBI tax ID(s): 486270 (species)

Other strains from Hymenobacter antarcticus

H. antarcticus JCM 17217, LMG 26017 (type strain)
H. antarcticus JCM 17213
H. antarcticus JCM 17215
H. antarcticus JCM 17219
H. antarcticus JCM 17220
H. antarcticus JCM 17222

Section

Hymenobacter antarcticus JCM 17216 is a psychrophilic bacterium that was isolated from Basal ice.

psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Hymenobacteraceae*
	Genus	*Hymenobacter*
	Species	**Hymenobacter antarcticus**
	Full Scientific Name (LPSN)	Hymenobacter antarcticus Klassen and Foght 2011

Synonym

"Siccationidurans antarcticus"

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	18 °C

[Ref.: #67770]

Temperature range

psychrophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Basal ice
[Ref.: #67770]	Geographic location (country and/or sea, region)	Victoria Upper Glacier
[Ref.: #67770]	Country	Antarctica
[Ref.: #67770]	Country ISO 3 Code	ATA
[Ref.: #67770]	Continent	Antarctica
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence EU155011 (>99% sequence identity) for Siccationidurans antarcticus from Microbeatlas

Aquatic Samples	37
Soil Samples	86
Animal Samples	30
Plant Samples	6
Total Samples	159

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Hymenobacter antarcticus strain VUG-A34 16S ribosomal RNA gene, partial sequence	EU155011	1438	ENA	486270 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 17216

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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Search for species Hymenobacter antarcticus in external resources:
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