Name: Nocardia elegans JCM 15879
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 161679

Type strain:

Species: Nocardia elegans

Culture col. no.: JCM 15879, ATCC 33727, IFM 0307

Strain history: IFM 0307 (Nocardia nova) <-- M. Tsukamura 23204 <-- A. Kobayashi.

NCBI tax ID(s): 300029 (species)

Special Collections

Other strains from Nocardia elegans

Section

Nocardia elegans JCM 15879 is a spore-forming bacterium that was isolated from Sputum.

spore-forming
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia elegans**
	Full Scientific Name (LPSN)	Nocardia elegans Yassin and Brenner 2005

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %91.485

[Ref.: #69480]	Motility	no Confidence in %90

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

yes Confidence in %96

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sputum
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nocardia nova ATCC 33727	GCA_003023865	contig	GenBank ENA	37330 tax ID
[Ref.: #66792]	Nocardia nova strain ATCC 33727	37330.25	wgs	PATRIC	37330 tax ID	*
[Ref.: #66792]	Nocardia nova ATCC 33727	2856088944	draft	JGI IMG/M	37330 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nocardia nova strain ATCC 33727 PATRIC: 37330.25
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	96	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nocardia nova strain ATCC 33727 PATRIC: 37330.25
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	91.485	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	91.662	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	62.311	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	88.317	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.4	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 15879, ATCC 33727, IFM 0307

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Nocardia nova strain ATCC 33727

Nocardia nova strain ATCC 33727

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