Name: Cohnella zeiphila CBP-2801
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 160813

Type strain:

Species: Cohnella zeiphila

Strain Designation: CBP-2801

Culture col. no.: DSM 111598

Strain history: <- E. Johnson, USDA / ARS; CBP-2801

NCBI tax ID(s): 2761120 (species)

SI-ID 398032

DSM 111598

Section

Cohnella zeiphila CBP-2801 is a spore-forming, mesophilic, motile bacterium that was isolated from Zea mays callus .

motile
spore-forming
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Cohnella*
	Species	**Cohnella zeiphila**
	Full Scientific Name (LPSN)	Cohnella zeiphila Johnson et al. 2022

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	yes Confidence in %97.573

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67750]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #67750]

Culture medium growth

[Ref.: #67750]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67750]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67750]			growth	37 °C

[Ref.: #67750]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	yes Confidence in %100
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67750]	Sample type/isolated from	Zea mays callus (Black Mexican Sweet)
[Ref.: #67750]	Geographic location (country and/or sea, region)	Peoria, Illinois
[Ref.: #67750]	Country	USA
[Ref.: #67750]	Country ISO 3 Code	USA
[Ref.: #67750]	Continent	North America
[Ref.: #67750]	Geographic location	40.7516°/-89.6173°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Cohnella zeiphila CBP-2801	GCA_014212055	scaffold	GenBank	2761120 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Cohnella zeiphila CBP-2801 NCBI: GCA_014212055.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Cohnella zeiphila CBP-2801 NCBI: GCA_014212055.1
[Ref.: #69480]	flagellated	yes	65.619	no
[Ref.: #69480]	gram-positive	yes	80.799	no
[Ref.: #69480]	anaerobic	no	99.488	no
[Ref.: #69480]	aerobic	yes	90.997	no
[Ref.: #69480]	halophile	no	94.65	no
[Ref.: #69480]	spore-forming	yes	94.733	no
[Ref.: #69480]	glucose-util	yes	89.557	no
[Ref.: #69480]	thermophile	no	96.882	yes
[Ref.: #69480]	motile	yes	86.384	no
[Ref.: #69480]	glucose-ferment	no	91.295	no

Availability in culture collections External links

[Ref.: #67750]

Culture collection no.

DSM 111598

[Ref.: #113021]

SI-ID 398032

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Cohnella zeiphila sp. nov., a bacterium isolated from maize callus cultures.	Johnson ET, Dowd PF, Skory CD, Dunlap CA	Antonie Van Leeuwenhoek	10.1007/s10482-020-01495-2	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67750

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 111598

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#113021

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398032.1 )

* These data were automatically processed and therefore are not curated

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