Name: Paenibacillus tyrfis DSM 100708
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 160658

Type strain:

Species: Paenibacillus tyrfis

Culture col. no.: DSM 100708, MSt 1

Strain history: <- L.-H. Lee, Monash Univ., Malaysia; MSt1 <- Y.-K. Aw and S.-M. Lee

NCBI tax ID(s): 1501230 (species)

Special Collections

DSMZ

Section

Paenibacillus tyrfis DSM 100708 is a bacterium that was isolated from North Selangor peat swamp forest.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	"Paenibacillus tyrfis"
	Full Scientific Name (LPSN)	Paenibacillus tyrfis Aw et al. 2016

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67568]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #67568]

Culture medium growth

[Ref.: #67568]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67568]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67568]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67568]	Sample type/isolated from	North Selangor peat swamp forest
[Ref.: #67568]	Geographic location (country and/or sea, region)	North Selangor
[Ref.: #67568]	Country	Malaysia
[Ref.: #67568]	Country ISO 3 Code	MYS
[Ref.: #67568]	Continent	Asia
[Ref.: #67568]	Geographic location	3.6586°/101.3220°
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KT216503 (>99% sequence identity) for Paenibacillus from Microbeatlas

Aquatic Samples	35
Soil Samples	257
Animal Samples	97
Plant Samples	15
Total Samples	404

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67568]	Paenibacillus tyrfis strain MSt1 16S ribosomal RNA gene, partial sequence	KT216503	1498	GenBank ENA	1501230 tax ID

Availability in culture collections External links

[Ref.: #67568]

Culture collection no.

DSM 100708, MSt 1

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Newly Isolated Paenibacillus tyrfis sp. nov., from Malaysian Tropical Peat Swamp Soil with Broad Spectrum Antimicrobial Activity.	Aw YK, Ong KS, Lee LH, Cheow YL, Yule CM, Lee SM	Front Microbiol	10.3389/fmicb.2016.00219	2016	*
Phylogeny	Paenibacillus oleatilyticus sp. nov., isolated from soil.	Chauhan NS, Joseph N, Shaligram S, Chavan N, Joshi A, Dhotre D, Lodha T, Shouche Y	Arch Microbiol	10.1007/s00203-022-03116-0	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67568

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100708

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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