Name: Lactobacillus corticis B40
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 160548

Type strain:

Species: Lactobacillus corticis

Strain Designation: B40

Culture col. no.: DSM 107967, JCM 32597

Strain history: <- M. Tohno, National Agriculture and Food Res. Org. (NARO), Tochigi, Japan; strain B40

NCBI tax ID(s): 2201249 (species)

SI-ID 396627

DSM 107967

Section

Lactobacillus corticis B40 is a mesophilic bacterium that was isolated from composted hardwood bark.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Lactobacillus*
	Species	**Lactobacillus corticis**
	Full Scientific Name (LPSN)	Lactobacillus corticis Tohno et al. 2021

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67456]

Culture medium

MRS MEDIUM (DSMZ Medium 11)

[Ref.: #67456]

Culture medium growth

[Ref.: #67456]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67456]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67456]			growth	30 °C

[Ref.: #67456]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67456]	Sample type/isolated from	composted hardwood bark
[Ref.: #67456]	Geographic location (country and/or sea, region)	Tochigi
[Ref.: #67456]	Country	Japan
[Ref.: #67456]	Country ISO 3 Code	JPN
[Ref.: #67456]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Lactobacillus corticis B40	GCA_018327645	contig	GenBank	2201249 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactobacillus corticis B40 NCBI: GCA_018327645.1
[Ref.: #69480]	flagellated	no	97.944	no
[Ref.: #69480]	gram-positive	yes	95.834	no
[Ref.: #69480]	anaerobic	no	54.413	no
[Ref.: #69480]	aerobic	no	96.939	no
[Ref.: #69480]	halophile	yes	67.912	no
[Ref.: #69480]	spore-forming	no	97.233	no
[Ref.: #69480]	thermophile	no	98.625	yes
[Ref.: #69480]	glucose-util	yes	90.108	no
[Ref.: #69480]	motile	no	95.571	no
[Ref.: #69480]	glucose-ferment	yes	88.32	no

Availability in culture collections External links

[Ref.: #67456]

Culture collection no.

DSM 107967, JCM 32597

[Ref.: #112790]

SI-ID 396627

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Lactobacillus corticis sp. nov., isolated from hardwood bark.	Tohno M, Tanizawa Y, Kojima Y, Sakamoto M, Ohkuma M, Kobayashi H	Int J Syst Evol Microbiol	10.1099/ijsem.0.004882	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67456

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107967

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#112790

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396627.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Lactobacillus corticis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF