Name: Brevibacillus sp. SYP-B805
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 160514

Type strain:

Species: Brevibacillus sp.

Strain Designation: SYP-B805

Culture col. no.: DSM 29172

Strain history: <- Y. Zhang, Shenyang Pharmaceutical Univ., China; SYP-B805 <- M. Zhang and Y. Zhang

NCBI tax ID(s): 1882945 (species)

SI-ID 406312

DSM 29172

Special Collections

DSMZ

Other strains from Brevibacillus sp.

Section

Brevibacillus sp. SYP-B805 is a spore-forming, motile bacterium that was isolated from soil.

motile
spore-forming
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Brevibacillus*
	Full Scientific Name (LPSN)	Brevibacillus Shida et al. 1996

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67422]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #67422]

Culture medium growth

[Ref.: #67422]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67422]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67422]			growth	50 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67422]	Sample type/isolated from	soil
[Ref.: #67422]	Geographic location (country and/or sea, region)	Yunnan Province
[Ref.: #67422]	Country	China
[Ref.: #67422]	Country ISO 3 Code	CHN
[Ref.: #67422]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Brevibacillus sp. SYP-B805	GCA_011059135	scaffold	GenBank ENA	1578199 tax ID	*
[Ref.: #66792]	Brevibacillus sp. SYP-B805	1578199.4	wgs	PATRIC	1578199 tax ID	*
[Ref.: #66792]	Brevibacillus sp. SYP-B805	2898907183	draft	JGI IMG/M	1578199 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Brevibacillus sp. SYP-B805 SYP-B805 NCBI: GCA_011059135.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	60.192	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	92.521	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	70.321	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	87.287	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	70.123	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	79.506	no

Availability in culture collections External links

[Ref.: #67422]

Culture collection no.

DSM 29172

[Ref.: #112757]

SI-ID 406312

Literature:

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	A thermostable Cas12b from Brevibacillus leverages one-pot discrimination of SARS-CoV-2 variants of concern.	Nguyen LT, Macaluso NC, Pizzano BLM, Cash MN, Spacek J, Karasek J, Miller MR, Lednicky JA, Dinglasan RR, Salemi M, Jain PK	EBioMedicine	10.1016/j.ebiom.2022.103926	2022	*
	A Thermostable Cas12b from Brevibacillus Leverages One-pot Detection of SARS-CoV-2 Variants of Concern.	Nguyen LT, Macaluso NC, Pizzano BLM, Cash MN, Spacek J, Karasek J, Dinglasan RR, Salemi M, Jain PK	medRxiv	10.1101/2021.10.15.21265066	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67422

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29172

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#112757

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406312.1 )

* These data were automatically processed and therefore are not curated

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Brevibacillus sp. SYP-B805 SYP-B805

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