Name: Brevibacillus sp. Leaf182
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131659

Type strain:

Species: Brevibacillus sp.

Strain Designation: Leaf182

Culture col. no.: DSM 102581

Strain history: <- J. A. Vorholt, Institute of Microbiology, ETH Zurich, Switzerland; Leaf182 <- D. B. Müller, E. Potthoff and M. Remus-Emsermann

NCBI tax ID(s): 1882945 (species)

SI-ID 403145

DSM 102581

Special Collections

Other strains from Brevibacillus sp.

Section

Brevibacillus sp. Leaf182 is a spore-forming bacterium that was isolated from leaf of Arabidopsis thaliana, wild-type genotype.

spore-forming
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Brevibacillus*
	Full Scientific Name (LPSN)	Brevibacillus Shida et al. 1996

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23455]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #23455]

Culture medium growth

[Ref.: #23455]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23455]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23455]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23455]	Sample type/isolated from	leaf of Arabidopsis thaliana, wild-type genotype
[Ref.: #23455]	Host species	Arabidopsis thaliana
[Ref.: #23455]	Geographic location (country and/or sea, region)	Brugg (47.4816806N 8.217547222E)
[Ref.: #23455]	Country	Switzerland
[Ref.: #23455]	Country ISO 3 Code	CHE
[Ref.: #23455]	Continent	Europe
[Ref.: #23455]	Geographic location	47.4817°/8.2176°
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Leaf (Phyllosphere)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Brevibacillus sp. Leaf182	GCA_001423865	scaffold	GenBank ENA	1736290 tax ID	*
[Ref.: #66792]	Brevibacillus sp. Leaf182	1736290.3	wgs	PATRIC	1736290 tax ID	*
[Ref.: #66792]	Brevibacillus sp. Leaf182	2643221814	draft	JGI IMG/M	1736290 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Brevibacillus sp. Leaf182 Leaf182 NCBI: GCA_001423865.2
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	56.271	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	98.112	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	76.195	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	88.909	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.199	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	83.85	no

Availability in culture collections External links

[Ref.: #23455]

Culture collection no.

DSM 102581

[Ref.: #90056]

SI-ID 403145

Literature:

	Title	Authors	Journal	DOI	Year
Phylogeny	Bipartite interactions, antibiotic production and biosynthetic potential of the Arabidopsis leaf microbiome.	Helfrich EJN, Vogel CM, Ueoka R, Schafer M, Ryffel F, Muller DB, Probst S, Kreuzer M, Piel J, Vorholt JA	Nat Microbiol	10.1038/s41564-018-0200-0	2018	*
	Polyketide-derived macrobrevins from marine macroalga-associated Bacillus amyloliquefaciens as promising antibacterial agents against pathogens causing nosocomial infections.	Chakraborty K, Kizhakkekalam VK, Joy M	Phytochemistry	10.1016/j.phytochem.2021.112983	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23455

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102581

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#90056

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403145.1 )

* These data were automatically processed and therefore are not curated

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Brevibacillus sp. Leaf182 Leaf182

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