Cite this strain

"Mycobacterium numidiamassiliense" (DSM 103274, CSUR P2567, AB215)

BacDive ID 160156

Type strain

Strain Designation AB215

Culture col. no. DSM 103274 CSUR P2567 AB215

NCBI tax ID(s) 1841861

Special Collections DSMZ

Links

"Mycobacterium numidiamassiliense" AB215 is a mesophilic prokaryote that was isolated from Soil from tomato planting from a garden center.

mesophilic genome sequence

Name and taxonomic classification

SI-ID 404699

DSM 103274

@ref 20215

Last LPSN update 2025-12-16 10:08:25

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Mycobacteriaceae

Genus Mycobacterium

Species "Mycobacterium numidiamassiliense"

Full scientific name Mycobacterium numidiamassiliense Bouam et al. 2018

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	92.1

Multimedia

@ref:	67060
multimedia content:	DSM_103274.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_103274.jpg
caption:	Medium 250 28°C
intellectual property rights:	Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
67060	MIDDLEBROOK MEDIUM (DSMZ Medium 645)		Medium recipe at MediaDive	Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67060	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.1

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
67060	Soil from tomato planting from a garden center	town of Cabriès	France	FRA	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
66792	PRJEB19151 assembly for Mycobacterium numidiamassiliense AB215	contig	GCA_900157365	2862917077	1841861	73.46

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Mycobacterium numidiamassiliense AB215
NCBI: GCA_900157365

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	53.20	no
125439	motility	BacteriaNetⓘ	no	80.90	no
125439	gram_stain	BacteriaNetⓘ	positive	92.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.10	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mycobacterium terramassiliense, Mycobacterium rhizamassiliense and Mycobacterium numidiamassiliense sp. nov., three new Mycobacterium simiae complex species cultured from plant roots.	Bouam A, Armstrong N, Levasseur A, Drancourt M	Sci Rep	10.1038/s41598-018-27629-1	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67060	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 103274
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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"Mycobacterium numidiamassiliense" (DSM 103274, CSUR P2567, AB215)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_900157365

Genome-based predictions

Predictions

Literature

Literature

References

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