Name: Nocardia bovistercoris NEAU-351
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 160092

Type strain:

Species: Nocardia bovistercoris

Strain Designation: NEAU-351

Culture col. no.: DSM 110681, CCTCC AA 2019090

Strain history: <- J. Zhao, School of Life Science, Northeast Agricultural Univ. (NEAU), Harbin, China; NEAU-351 <- J. Zhao, School of Life Science, Northeast Agricultural Univ. (NEAU), Harbin, China; NEAU-351

NCBI tax ID(s): 2785916 (species)

SI-ID 406344

DSM 110681

Section

Nocardia bovistercoris NEAU-351 is a mesophilic bacterium that was isolated from cattle feces.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia bovistercoris**
	Full Scientific Name (LPSN)	Nocardia bovistercoris Zhang et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %91.314

[Ref.: #69273]	Colony color	Ivory (1014)
[Ref.: #69273]	Cultivation medium used	ISP 2

[Ref.: #69273]	Colony color	Light ivory (1015)
[Ref.: #69273]	Cultivation medium used	ISP 6

[Ref.: #69273]	Colony color	Olive grey (7002), agate grey (7038)
[Ref.: #69273]	Cultivation medium used	suter with tyrosine

[Ref.: #69273]	Colony color	Olive grey (7002), agate grey (7038)
[Ref.: #69273]	Cultivation medium used	suter without tyrosine

[Ref.: #69273]	Colony color	Oyster white (101), signal white (9003)
[Ref.: #69273]	Cultivation medium used	ISP 5

[Ref.: #69273]	Colony color	Oyster white (1013)
[Ref.: #69273]	Cultivation medium used	ISP 4

[Ref.: #69273]	Colony color	Oyster white (1013), signal white (9003)
[Ref.: #69273]	Cultivation medium used	ISP 3

[Ref.: #69273]	Colony color	Oyster white (1013), signal white (9003)
[Ref.: #69273]	Cultivation medium used	ISP 7

[Ref.: #69273]	Pigment production	no
[Ref.: #69273]	Pigment name	Melanin
[Ref.: #69273]	Pigment production	no
[Ref.: #69273]	Pigment name	soluble pigment

[Ref.: #69273]	Multicellular complex forming ability	no
[Ref.: #69273]	Multicellular complex name	Aerial mycelium
[Ref.: #69273]	Medium Name (multicellularity)	ISP 2

[Ref.: #69273]	Multicellular complex forming ability	no
[Ref.: #69273]	Multicellular complex name	Aerial mycelium
[Ref.: #69273]	Medium Name (multicellularity)	ISP 3

[Ref.: #69273]	Multicellular complex forming ability	no
[Ref.: #69273]	Multicellular complex name	Aerial mycelium
[Ref.: #69273]	Medium Name (multicellularity)	ISP 4

[Ref.: #69273]	Multicellular complex forming ability	no
[Ref.: #69273]	Multicellular complex name	Aerial mycelium
[Ref.: #69273]	Medium Name (multicellularity)	ISP 5

[Ref.: #69273]	Multicellular complex forming ability	no
[Ref.: #69273]	Multicellular complex name	Aerial mycelium
[Ref.: #69273]	Medium Name (multicellularity)	ISP 6

[Ref.: #69273]	Multicellular complex forming ability	no
[Ref.: #69273]	Multicellular complex name	Aerial mycelium
[Ref.: #69273]	Medium Name (multicellularity)	ISP 7

[Ref.: #69273]	Multicellular complex forming ability	no
[Ref.: #69273]	Multicellular complex name	Aerial mycelium
[Ref.: #69273]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69273]	Multicellular complex forming ability	no
[Ref.: #69273]	Multicellular complex name	Aerial mycelium
[Ref.: #69273]	Medium Name (multicellularity)	suter without tyrosine

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66996]

Culture medium

ISP2 MEDIUM (DSMZ Medium 987)

[Ref.: #66996]

Culture medium growth

[Ref.: #66996]

Culture medium link

Medium recipe at MediaDive

[Ref.: #66996]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #66996]			growth	28 °C

[Ref.: #66996]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	no Confidence in %96.503
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69273]		NaCl		growth	0	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	+	assimilation	* from API 20NE
[Ref.: #69273]	arabinose ChEBI	-	growth
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #69273]	cellulose ChEBI	-	growth
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE, API Coryne
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68379]	esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69273]	fructose ChEBI	-	growth
[Ref.: #68369]	gelatin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #68369]	gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #69273]	glucose ChEBI	+	growth
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69273]	inositol ChEBI	-	growth
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68369]	malate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69273]	mannose ChEBI	-	growth
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE, API Coryne
[Ref.: #69273]	raffinose ChEBI	-	growth
[Ref.: #69273]	rhamnose ChEBI	-	growth
[Ref.: #69273]	sucrose ChEBI	-	growth
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69273]	xylose ChEBI	-	growth
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68379]	alkaline phosphatase	-	3.1.3.1	* from API Coryne
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68379]	beta-galactosidase	-	3.2.1.23	* from API Coryne
[Ref.: #68369]	beta-glucosidase	+	3.2.1.21	* from API 20NE, API zym
[Ref.: #68379]	beta-glucosidase	-	3.2.1.21	* from API Coryne
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #68369]	gelatinase	+		* from API 20NE
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68369]	urease	+	3.5.1.5	* from API 20NE
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
	Only first 10 entries are displayed. Click here to see all.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #66996]	25096	-	-	-	-	+	+	+	+/-	+	-	-	-	-	-	+	-	+	-	-	-	not determinedn.d.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69273]	3767	-	-	-	-	-	-	+	-	-	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #66996]	14243	-	+/-	+/-	+/-	-	+	+/-	-	-	-	+	+	-	+/-	-	+	+	-	-	-
[Ref.: #69273]	5951	not determinedn.d.	+/-	+/-	+	+/-	+	+	+/-	-	+/-	+	+/-	-	+/-	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66996]	Sample type/isolated from	cattle feces
[Ref.: #66996]	Geographic location (country and/or sea, region)	Shangzhi city, Heilongjiang province
[Ref.: #66996]	Country	China
[Ref.: #66996]	Country ISO 3 Code	CHN
[Ref.: #66996]	Continent	Asia
[Ref.: #66996]	Geographic location	45.1000°/127.5500°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #69273]	Nocardia bovistercoris strain NEAU-351 16S ribosomal RNA gene, partial sequence	MW250206		ENA

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Nocardia bovistercoris NEAU-351	GCA_015674855	scaffold	GenBank	2785916 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nocardia bovistercoris NEAU-351 NCBI: GCA_015674855.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nocardia bovistercoris NEAU-351 NCBI: GCA_015674855.1
[Ref.: #69480]	flagellated	no	98.508	no
[Ref.: #69480]	gram-positive	yes	87.79	no
[Ref.: #69480]	anaerobic	no	98.944	no
[Ref.: #69480]	aerobic	yes	91.816	no
[Ref.: #69480]	halophile	no	94.627	yes
[Ref.: #69480]	spore-forming	yes	80.678	no
[Ref.: #69480]	thermophile	no	98.886	no
[Ref.: #69480]	glucose-util	yes	85.932	no
[Ref.: #69480]	motile	no	93.868	no
[Ref.: #69480]	glucose-ferment	no	91.276	yes

Availability in culture collections External links

[Ref.: #66996]

Culture collection no.

DSM 110681, CCTCC AA 2019090

[Ref.: #112368]

SI-ID 406344

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardia bovistercoris sp. nov., an actinobacterium isolated from cow dung.	Zhang X, Zhang L, Yu X, Zhang J, Jiao Y, Ju H, Wang X, Zhao J, Xiang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.004699	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66996

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110681

#68369

Automatically annotated from API 20NE .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69273

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#112368

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406344.1 )

* These data were automatically processed and therefore are not curated

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