Prevotella mizrahii (DSM 108495, LKV-178-WT-2A, JCM 34422)

Name: Prevotella mizrahii (DSM 108495, LKV-178-WT-2A, JCM 34422)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159435

Type strain

Strain Designation LKV-178-WT-2A

Culture col. no. DSM 108495 LKV-178-WT-2A JCM 34422

NCBI tax ID(s) 2606637

Special Collections DSMZ JCM Pig DZIF

History <- T. Clavel , TU Munich, Freising-Weihenstephan, Germany; LKV-178-WT-2A B. Abt; DSMZ, Germany; DSM 108495 (=LKV-178-WT-2A) <-- T. Clavel; RWTH Aachen, Germany.

Links

Prevotella mizrahii LKV-178-WT-2A is a mesophilic prokaryote that was isolated from pig, WT, 3 months old, feces.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 398748

JCM 34422,DSM 108495

@ref 20215

Last LPSN update 2026-02-09 11:38:37

Domain Bacteria

Phylum Bacteroidota

Class Bacteroidia

Order Bacteroidales

Family Prevotellaceae

Genus Prevotella

Species Prevotella mizrahii

Full scientific name Prevotella mizrahii Wylensek et al. 2021

Synonyms (1)

Hallella mizrahii

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	95.234
125439	negative	98.8

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
66258	FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)		Medium recipe at MediaDive	Name: FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a) Composition: Fastidious Anaerobe Basal Broth 35.4 g/l Distilled water
66258	WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339)		Medium recipe at MediaDive	Name: WILKINS-CHALGREN ANAEROBE BROTH (DSMZ Medium 339) Composition: dehydrated Wilkins-Chalgren medium 33.0 g/l L-Cysteine HCl 0.3 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
66258	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		99.7

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Mammals	#Suidae (Pig,Swine)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
66258	pig, WT, 3 months old, feces	Kranzberg (Bavaria)	Germany	DEU	Europe
67770	Feces of a German Landrace pig	Freising	Germany	DEU	Europe

Taxonmaps

69479

Global distribution of 16S sequence MN537546 (>99% sequence identity) for Prevotellaceae from Microbeatlas

Aquatic Samples	10
Soil Samples	19
Animal Samples	3012
Plant Samples	28
Total Samples	3069

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM969577v1 assembly for Hallella mizrahii LKV-178-WT-2A	contig	GCA_009695775	2606637.3	2937440672	2606637	57.87

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
66258	Hallella mizrahii strain LKV-178-WT-2A 16S ribosomal RNA gene, partial sequence	MN537546	1493		2652308

GC content

@ref	GC-content (mol%)	Method
67770	49.9	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Hallella mizrahii LKV-178-WT-2A
NCBI: GCA_009695775

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.70	no
125439	motility	BacteriaNetⓘ	yes	63.40	no
125439	gram_stain	BacteriaNetⓘ	negative	98.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	88.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Prevotellaceae bacterium LKV-178-WT-2A
PATRIC: 2606637.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.23	no
125438	anaerobic	anaerobicⓘ	yes	89.31	no
125438	spore-forming	spore-formingⓘ	no	88.46	no
125438	aerobic	aerobicⓘ	no	92.77	no
125438	thermophilic	thermophileⓘ	no	91.25	yes
125438	flagellated	motile2+ⓘ	no	89.50	no

Literature

Title	Authors	Journal	DOI	Year
Description and comparative genome analysis of Hallella absiana sp. nov., isolated from pig feces.	Bai L, Paek J, Kim H, Kim SH, Shin JH, Kook JK, Chang YH.	Anaerobe	10.1016/j.anaerobe.2023.102735	2023

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66258	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 108495
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Prevotella mizrahii (DSM 108495, LKV-178-WT-2A, JCM 34422)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_009695775

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media