Name: Actinoplanes maris M4I6
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 159205

Type strain:

Species: Actinoplanes maris

Strain Designation: M4I6

Culture col. no.: DSM 101017

Strain history: <- Q. Xie, Inst. of Tropical Bioscience, Haikou,China; M4I6

NCBI tax ID(s): 1871 (species)

SI-ID 403094

DSM 101017

Section

Actinoplanes maris M4I6 is a mesophilic bacterium that was isolated from sediment.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Actinoplanes*
	Species	**Actinoplanes maris**
	Full Scientific Name (LPSN)	Actinoplanes maris Xie et al. 2023

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #66028]

Caption:

Medium 553 28°C

[Ref.: #66028]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #66028]

Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

[Ref.: #66028]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

[Ref.: #66028]

Culture medium

ISP2 MEDIUM (DSMZ Medium 987)

[Ref.: #66028]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #66028]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #66028]			growth	28 °C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #66028]	Sample type/isolated from	sediment
[Ref.: #66028]	Geographic location (country and/or sea, region)	Syros, Megas Gialos
[Ref.: #66028]	Country	Greece
[Ref.: #66028]	Country ISO 3 Code	GRC
[Ref.: #66028]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Sediment
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KR347174 (>99% sequence identity) for Actinoplanes from Microbeatlas

Aquatic Samples	4
Soil Samples	69
Animal Samples	36
Plant Samples	4
Total Samples	113

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66028]	Actinoplanes sp. M4I6 16S ribosomal RNA gene, partial sequence	KR347174	1479	ENA	1734446 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Actinoplanes maris M4I6	GCA_023544465	contig	GenBank	1734446 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinoplanes sp. M4I6 M4I6 NCBI: GCA_023544465.1
[Ref.: #69480]	flagellated	no	88.609	no
[Ref.: #69480]	gram-positive	yes	89.998	no
[Ref.: #69480]	anaerobic	no	99.207	no
[Ref.: #69480]	aerobic	yes	94.501	no
[Ref.: #69480]	halophile	no	95.175	no
[Ref.: #69480]	spore-forming	yes	91.059	no
[Ref.: #69480]	motile	yes	62.578	no
[Ref.: #69480]	glucose-ferment	no	89.114	no
[Ref.: #69480]	thermophile	no	99.15	yes
[Ref.: #69480]	glucose-util	yes	90.33	no

Availability in culture collections External links

[Ref.: #66028]

Culture collection no.

DSM 101017

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SI-ID 403094

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66028

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 101017

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#111704

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403094.1 )

* These data were automatically processed and therefore are not curated

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Actinoplanes sp. M4I6 M4I6

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