Nonomuraea longispora (DSM 102917, CGMCC 4.7339, KCTC 39781)

Name: Nonomuraea longispora (DSM 102917, CGMCC 4.7339, KCTC 39781)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 159166

Type strain

Strain Designation KC201

Culture col. no. DSM 102917 CGMCC 4.7339 KCTC 39781 KC201

NCBI tax ID(s) 1848320

Special Collections DSMZ KCTC Wink compendium Literature strains

History DSMZ <- N. Sahin, Ondokuz Mayis University, Samsun, Turkey; KC201 <- H. Saygin and N. Sahin; KC201 KCTC <- Nevzat Sahin

Links

Nonomuraea longispora KC201 is an aerobe, Gram-positive bacterium that builds an aerial mycelium and was isolated from desert soil.

Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 399093

KCTC 39781,DSM 102917

@ref 20215

Last LPSN update 2026-05-29 08:44:07

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Streptosporangiales

Family Streptosporangiaceae

Genus Nonomuraea

Species Nonomuraea longispora

Full scientific name Nonomuraea longispora Saygin et al. 2020

Morphology

Cell morphology

@ref	Confidence	Gram stain
125439	92.844
125439	98.881	positive
69554		positive

Colony morphology

@ref	Colony color	Medium used
69263	Clay brown (8003)	suter with tyrosine
69263	Lemon yellow (1012)	ISP 3
69263	Light ivory (1015)	ISP 4
69263	Ochre brown (8001)	suter without tyrosine
69263	Ochre yellow (1024)	ISP 6
69263	Ochre yellow (1024), black red (3007), purple red (3004)	ISP 2
69263	Ochre yellow (1024), oxide red (3009), fawn brown (8007)	ISP 5
69263	Pale brown (8025)	ISP 7

Multicellular morphology

@ref	Complex name	Complex color	Medium name
69263	Aerial mycelium	Signal white (9003)	ISP 2
69263	Aerial mycelium	Signal white (9003)	ISP 3
69263	Aerial mycelium		ISP 4
69263	Aerial mycelium		ISP 5
69263	Aerial mycelium		ISP 6
69263	Aerial mycelium	Signal white (9003)	ISP 7
69263	Aerial mycelium		suter with tyrosine
69263	Aerial mycelium		suter without tyrosine

Pigmentation

@ref	Production	Name
69263		melanin pigment
69263		soluble pigment

Multimedia

@ref:	65989
multimedia content:	DSM_102917.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_102917.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
65989	N-Z-AMINE-MEDIUM (DSMZ Medium 554)	Medium recipe at MediaDive	Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water
65989	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
65989	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
65989	positive	growth	28
67771	positive	growth	28
69554	positive	growth	20-37
69554	positive	optimum	28

Culture pH

@ref	Ability	Type	PH
69554	positive	optimum	7
69554	positive	growth	6.0-9.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
67771	aerobe
125439	obligate aerobe	98.925

Halophily

@ref	Salt	Growth	Tested relation	Concentration
69263	NaCl	positive	growth	0-2.5 %
69554	NaCl	positive	growth	0-3 %(w/v)
69554	NaCl		growth	0-4 %(w/v)

Observation

@ref	Observation
69554	The polar lipids profile includes diphosphatidylglycerol, phosphatidylmonomethylethanolamine, phosphatidylethanolamine, hydroxy-phosphatidylethanolamine, dihydroxy-phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol, glycophospholipids, phospholipids, a glycolipid and lipids.
69554	Whole-cell hydrolysates contain meso-A 2pm, glucose, mannose, madurose and ribose, and a trace of galactose.
69554	Good growth occurs on ISP 2, modified Bennett's, Czapek's, tryptic soy and nutrient agar, moderate growth on ISP 4, 5 and 7 agar and weak growth on ISP 6 agar substrate mycelia may be brown or cream, not produce diffusible or melanoid pigments.

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
69554	18240 ChEBI	4-hydroxy-L-proline	+	nitrogen source
69554	16708 ChEBI	adenine	-	degradation
69554	15676 ChEBI	allantoin	-	hydrolysis
69263	22599 ChEBI	arabinose	+/-	growth
69554	18305 ChEBI	arbutin	+	hydrolysis
69554		casein	-	degradation
69554	17057 ChEBI	cellobiose	+	carbon source
69554	17057 ChEBI	cellobiose	+	energy source
69263	62968 ChEBI	cellulose	+/-	growth
69554	17029 ChEBI	chitin	-	degradation
69554	15824 ChEBI	D-fructose	-	carbon source
69554	15824 ChEBI	D-fructose	-	energy source
69554	12936 ChEBI	D-galactose	-	carbon source
69554	12936 ChEBI	D-galactose	-	energy source
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
69554	17634 ChEBI	D-glucose	+	carbon source
69554	17634 ChEBI	D-glucose	+	energy source
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
69554	16899 ChEBI	D-mannitol	+	carbon source
69554	16899 ChEBI	D-mannitol	+	energy source
69554	16024 ChEBI	D-mannose	-	carbon source
69554	16024 ChEBI	D-mannose	-	energy source
69554	16024 ChEBI	D-mannose	+	carbon source
69554	16024 ChEBI	D-mannose	+	energy source
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
69554	17924 ChEBI	D-sorbitol	-	carbon source
69554	17924 ChEBI	D-sorbitol	-	energy source
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
69554	52071 ChEBI	dextran	+	carbon source
69554	52071 ChEBI	dextran	+	energy source
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
69554	4853 ChEBI	esculin	+	hydrolysis
69263	28757 ChEBI	fructose	+	growth
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
69554	5291 ChEBI	gelatin	+	degradation
69263	17234 ChEBI	glucose	+	growth
69554	15428 ChEBI	glycine	+	nitrogen source
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
69554	16235 ChEBI	guanine	-	degradation
69554	16136 ChEBI	hydrogen sulfide	-
69554	17368 ChEBI	hypoxanthine	+	degradation
69554	15443 ChEBI	inulin	-	carbon source
69554	15443 ChEBI	inulin	-	energy source
69554	16977 ChEBI	L-alanine	+	nitrogen source
69554	30849 ChEBI	L-arabinose	-	carbon source
69554	30849 ChEBI	L-arabinose	-	energy source
69554	16467 ChEBI	L-arginine	+	nitrogen source
69554	17196 ChEBI	L-asparagine	+	nitrogen source
69554	17561 ChEBI	L-cysteine	+	nitrogen source
69554	18050 ChEBI	L-glutamine	-	carbon source
69554	18050 ChEBI	L-glutamine	-	energy source
69554	15971 ChEBI	L-histidine	-	nitrogen source
69554	16643 ChEBI	L-methionine	+	nitrogen source
69554	17203 ChEBI	L-proline	+	nitrogen source
69554	62345 ChEBI	L-rhamnose	-	carbon source
69554	62345 ChEBI	L-rhamnose	-	energy source
69554	17115 ChEBI	L-serine	+	nitrogen source
69554	17266 ChEBI	L-sorbose	-	carbon source
69554	17266 ChEBI	L-sorbose	-	energy source
69554	17895 ChEBI	L-tyrosine	+	nitrogen source
69554	16414 ChEBI	L-valine	+	nitrogen source
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
69554	17716 ChEBI	lactose	-	carbon source
69554	17716 ChEBI	lactose	-	energy source
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69554	17306 ChEBI	maltose	-	carbon source
69554	17306 ChEBI	maltose	-	energy source
69263	37684 ChEBI	mannose	+/-	growth
69554	6731 ChEBI	melezitose	-	carbon source
69554	6731 ChEBI	melezitose	-	energy source
69554	28053 ChEBI	melibiose	+	carbon source
69554	28053 ChEBI	melibiose	+	energy source
69263	17268 ChEBI	myo-inositol	+/-	growth
69554	17268 ChEBI	myo-inositol	-	carbon source
69554	17268 ChEBI	myo-inositol	-	energy source
69554	90730 ChEBI	N-glutaryl-L-phenylalanine 2-naphthylamide	+	nitrogen source
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
69554	17632 ChEBI	nitrate	+/-	reduction
69263	16634 ChEBI	raffinose	+/-	growth
69554	16634 ChEBI	raffinose	+	carbon source
69554	16634 ChEBI	raffinose	+	energy source
69263	26546 ChEBI	rhamnose	+	growth
69554	28017 ChEBI	starch	+	degradation
69263	17992 ChEBI	sucrose	+	growth
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
69554	17992 ChEBI	sucrose	-	carbon source
69554	17992 ChEBI	sucrose	-	energy source
69554	53423 ChEBI	tween 40	-	degradation
69554	53426 ChEBI	tween 80	-	degradation
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
69554	16199 ChEBI	urea	-	hydrolysis
69554	15318 ChEBI	xanthine	-	degradation
69554	17151 ChEBI	xylitol	-	carbon source
69554	17151 ChEBI	xylitol	-	energy source
69263	18222 ChEBI	xylose	+	growth

Metabolite production

@ref	Chebi-ID	Metabolite	Production
69554	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68382	cystine arylamidase	-	3.4.11.3	from API zym
68379	gelatinase	+		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
68379	urease	-	3.5.1.5	from API Coryne

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69263	-	-	-	+	-	-	+	+	-	-	+	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69263	not determinedn.d.	+	+/-	+/-	+/-	+	+/-	-	-	+	+	-	+/-	+	-	+	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Desert
#Environmental	#Terrestrial	#Soil
#Condition	#Xerophilic	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
65989	desert soil	Karakum Desert, Darvaz (40° 15' 38.13'' N, 58° 26' 20.39'' E)	Turkmenistan	TKM	Asia	40.2606	58.439 40.2606/58.439
67771	Desert Soil		Turkey	TUR	Asia
69554	desert soil sample collected from the Karakum Desert, Turkmenistan.	Karakum Desert	Turkmenistan	TKM	Asia

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM434834v1 assembly for Nonomuraea longispora KC201	contig	GCA_004348345	1848320.3	2866664766	1848320	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
65989	Nonomuraea longispora strain KC201 16S ribosomal RNA gene, partial sequence	MG770626	1479		1848320

GC content

@ref	GC-content (mol%)	Method
65989	70.6	sequence analysis
69554	70.6	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM434834v1 assembly for Nonomuraea longispora KC201
NCBI: GCA_004348345

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.93	no
125439	gram_stain	BacteriaNetⓘ	positive	98.88	no
125439	motility	BacteriaNetⓘ	no	92.84	no
125439	spore_formation	BacteriaNetⓘ	yes	75.53	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Polyphasic classification of Nonomuraea strains isolated from the Karakum Desert and description of Nonomuraea deserti sp. nov., Nonomuraea diastatica sp. nov., Nonomuraea longispora sp. nov. and Nonomuraea mesophila sp. nov.	Saygin H, Nouioui I, Ay H, Guven K, Cetin D, Klenk HP, Goodfellow M, Sahin N	Int J Syst Evol Microbiol	10.1099/ijsem.0.003808	2020

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#65989	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102917
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69263	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#69554	Hayrettin Saygin, Imen Nouioui, Hilal Ay, Kiymet Guven, Demet Cetin, Hans-Peter Klen2, Michael Goodfellow and Nevzat Sahin: Polyphasic classification of Nonomuraea strains isolated from the Karakum Desert and description of Nonomuraea deserti sp. nov., Nonomuraea diastatica sp. nov., Nonomuraea longispora sp. nov. and Nonomuraea mesophila sp. nov.. IJSEM 70: 2020 ( DOI 10.1099/ijsem.0.003808 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Nonomuraea longispora (DSM 102917, CGMCC 4.7339, KCTC 39781)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_004348345

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media