Name: Mesorhizobium wenxiniae S1-3-7
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158821

Type strain:

Species: Mesorhizobium wenxiniae

Strain Designation: S1-3-7

Culture col. no.: WYCCWR 10195, HAMBI 3692, LMG 30254

NCBI tax ID(s): 2014805 (species)

Section

Mesorhizobium wenxiniae S1-3-7 is an aerobe, psychrophilic, Gram-negative bacterium that forms circular colonies and was isolated from root nodule of Cicer arietinum.

colony-forming
Gram-negative
rod-shaped
aerobe
psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Phyllobacteriaceae*
	Genus	*Mesorhizobium*
	Species	**Mesorhizobium wenxiniae**
	Full Scientific Name (LPSN)	Mesorhizobium wenxiniae Zhang et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #65585]	Gram stain	negative

[Ref.: #65585]	Cell length	1.13 µm

[Ref.: #65585]	Cell width	0.38 µm

[Ref.: #65585]	Cell shape	rod-shaped

[Ref.: #65585]	Colony size	2-3 mm
[Ref.: #65585]	Colony color	white
[Ref.: #65585]	Colony shape	circular
[Ref.: #65585]	Incubation period	5-7 days
[Ref.: #65585]	Cultivation medium used	M-YMA

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65585]

Culture medium

M-YMA

[Ref.: #65585]

Culture medium growth

	Kind of temperature		Temperature
[Ref.: #65585]	no	growth	4 °C
[Ref.: #65585]	no	growth	10 °C
[Ref.: #65585]	no	growth	37 °C
[Ref.: #65585]	no	growth	60 °C

[Ref.: #65585]	Temperature range	psychrophilic
[Ref.: #65585]	Temperature range	mesophilic
[Ref.: #65585]	Temperature range	thermophilic

	Kind of pH		pH
[Ref.: #65585]		optimum	7
[Ref.: #65585]	no	growth	4-5
[Ref.: #65585]		growth	7-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #65585]

Oxygen tolerance

aerobe

[Ref.: #65585]

Ability of spore formation

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65585]	benzoate ChEBI	-	carbon source
[Ref.: #65585]	cellobiose ChEBI	+/-	carbon source
[Ref.: #65585]	D-fructose ChEBI	+/-	carbon source
[Ref.: #65585]	D-fucose ChEBI	+/-	carbon source
[Ref.: #65585]	D-galactose ChEBI	+/-	carbon source
[Ref.: #65585]	D-methionine ChEBI	-	carbon source
[Ref.: #65585]	D-sorbitol ChEBI	+/-	carbon source
[Ref.: #65585]	dl-alanine ChEBI	-	carbon source
[Ref.: #65585]	galactose ChEBI	+/-	carbon source
[Ref.: #65585]	glucose ChEBI	+/-	carbon source
[Ref.: #65585]	glycine ChEBI	-	carbon source
[Ref.: #65585]	hydroxyproline ChEBI	+/-	carbon source
[Ref.: #65585]	L-alanine ChEBI	+/-	carbon source
[Ref.: #65585]	L-aspartate ChEBI	-	carbon source
[Ref.: #65585]	L-cysteine 2-naphthylamide ChEBI	-	carbon source
[Ref.: #65585]	L-glutamate ChEBI	+/-	carbon source
[Ref.: #65585]	L-isoleucine ChEBI	+/-	carbon source
[Ref.: #65585]	L-lysine ChEBI	+/-	carbon source
[Ref.: #65585]	L-methionine ChEBI	-	carbon source
[Ref.: #65585]	L-ornithine ChEBI	+/-	carbon source
[Ref.: #65585]	L-phenylalanine ChEBI	+/-	carbon source
[Ref.: #65585]	L-proline ChEBI	+/-	carbon source
[Ref.: #65585]	L-rhamnose ChEBI	-	carbon source
[Ref.: #65585]	L-serine ChEBI	+/-	carbon source
[Ref.: #65585]	L-threonine ChEBI	+/-	carbon source
[Ref.: #65585]	L-tyrosine ChEBI	-	hydrolysis
[Ref.: #65585]	L-tyrosine ChEBI	+/-	carbon source
[Ref.: #65585]	L-valine ChEBI	+/-	carbon source
[Ref.: #65585]	malate ChEBI	-	carbon source
[Ref.: #65585]	malonate ChEBI	-	carbon source
[Ref.: #65585]	maltose ChEBI	+/-	carbon source
[Ref.: #65585]	raffinose ChEBI	+/-	carbon source
[Ref.: #65585]	sodium acetate ChEBI	+/-	carbon source
[Ref.: #65585]	sodium chloride ChEBI	+	growth
[Ref.: #65585]	sodium citrate ChEBI	-	carbon source
[Ref.: #65585]	sodium pyruvate ChEBI	+/-	carbon source
[Ref.: #65585]	starch ChEBI	+/-	hydrolysis
[Ref.: #65585]	sucrose ChEBI	+/-	carbon source
[Ref.: #65585]	tartrate ChEBI	-	carbon source
[Ref.: #65585]	tartrate ChEBI	+/-	carbon source
[Ref.: #65585]	tween 80 ChEBI	-	hydrolysis
[Ref.: #65585]	tyrosine ChEBI	-	carbon source
[Ref.: #65585]	urea ChEBI	+/-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #65585]	ampicillin ChEBI	yes	6	µg/mL
[Ref.: #65585]	chloramphenicol ChEBI				yes	100	µg/mL
[Ref.: #65585]	kanamycin ChEBI	yes	5	µg/mL
[Ref.: #65585]	tetracycline ChEBI	yes	5	µg/mL

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #65585]		catalase	+	1.11.1.6
[Ref.: #65585]		cytochrome oxidase	+	1.9.3.1

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #65585]

Fatty acid	Percentage
C19:0ω8c cyclo	51.4
11-methyl C18:1ω7c	9.5
C16:0	9.3
C18:1ω6c / C18:1ω7c	6.6
C17:0	4.8
C17:0 iso	4.6
C18:0	3.6
C20:2ω6,9c	1.3
C17:0 cyclo	1.1
C19:0	1.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65585]	Sample type/isolated from	root nodule of Cicer arietinum
[Ref.: #65585]	Geographic location (country and/or sea, region)	Huining, Gansu Province
[Ref.: #65585]	Country	China
[Ref.: #65585]	Country ISO 3 Code	CHN
[Ref.: #65585]	Continent	Asia
[Ref.: #65585]	Enrichment culture	M-YMA
[Ref.: #65585]	Enrichment culture composition	10 g D-mannitol, 1 g yeast extract, 0.5 g L-glutamate sodium, 0.5 g K2HPO4 , 0.1 g MgSO4 , 0.05 g NaCl2 , 0.04 g FeCl3 , 15-20 g agar, pH 6.8, in 1 l distilled water
[Ref.: #65585]	Enrichment culture temperature	28 ̊C
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root nodule

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KX132877 (>99% sequence identity) for Mesorhizobium from Microbeatlas

Aquatic Samples	507
Soil Samples	2635
Animal Samples	282
Plant Samples	1035
Total Samples	4459

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65585]	16S rRNA gene sequence	KX132877		GenBank

[Ref.: #65585]

GC-content

61.9 mol%

Availability in culture collections External links

[Ref.: #65585]

Culture collection no.

WYCCWR 10195, HAMBI 3692, LMG 30254

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mesorhizobium wenxiniae sp. nov., isolated from chickpea (Cicer arietinum L.) in China.	Zhang J, Guo C, Chen W, de Lajudie P, Zhang Z, Shang Y, Wang ET	Int J Syst Evol Microbiol	10.1099/ijsem.0.002770	2018	*
Phylogeny	Mesorhizobium xinjiangense sp. nov., isolated from rhizosphere soil of Alhagi sparsifolia.	Meng D, Liu YL, Zhang JJ, Gu PF, Fan XY, Huang ZS, Ji Y, Meng H, Du ZJ, Li WM, Li Q	Arch Microbiol	10.1007/s00203-021-02686-9	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65585

Junjie Zhang, Chen Guo, Chen Guo, Philippe de Lajudie, Zhiyan Zhang, Yimin Shang and En Tao Wang: Mesorhizobium wenxiniae sp. nov., isolated from chickpea (Cicer arietinum L.) in China. IJSEM 68: 1930 - 1936 2018 ( DOI 10.1099/ijsem.0.002770 , PubMed 29676730 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Mesorhizobium wenxiniae in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF