Name: Luteimonas rhizosphaerae 43803
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 158652

Type strain:

Species: Luteimonas rhizosphaerae

Strain Designation: 43803, 4-12

Culture col. no.: CCTCC AB 2016261, KCTC 52585

Strain history: <- Zhao Guoyan, Shandong Normal Univ.

NCBI tax ID(s): 1912093 (species)

Special Collections

Section

Luteimonas rhizosphaerae 43803 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from rhizosphere of Triticum aestivum L..

colony-forming
Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Luteimonas*
	Species	**Luteimonas rhizosphaerae**
	Full Scientific Name (LPSN)	Luteimonas rhizosphaerae Zhao et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #65379]	Gram stain	negative

[Ref.: #65379]	Cell length	1.7-2.8 µm

[Ref.: #65379]	Cell width	0.8-1 µm

[Ref.: #65379]	Cell shape	rod-shaped

[Ref.: #65379]	Motility	yes

[Ref.: #65379]	Colony color	yellow
[Ref.: #65379]	Colony shape	circular
[Ref.: #65379]	Incubation period	2 days
[Ref.: #65379]	Cultivation medium used	tryptic soy agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65379]

Culture medium

tryptic soy agar

[Ref.: #65379]

Culture medium growth

[Ref.: #65379]

Culture medium

MacConkey agar

[Ref.: #65379]

Culture medium growth

		Temperature
[Ref.: #65379]	growth	4-42 °C
[Ref.: #65379]	optimum	30 °C
[Ref.: #67771]	growth	28 °C

	pH	Kind of pH		pH
[Ref.: #65379]			optimum	7.5-8
[Ref.: #65379]			growth	6-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #65379]		NaCl		growth	0-4.5	%
[Ref.: #65379]		NaCl		optimum	1	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65379]	4-nitrophenyl beta-D-galactopyranoside ChEBI	-	hydrolysis
[Ref.: #65379]	adipate ChEBI	+	assimilation
[Ref.: #65379]	amygdalin ChEBI	+	builds acid from
[Ref.: #65379]	arbutin ChEBI	-	builds acid from
[Ref.: #65379]	aspartate ChEBI	+	carbon source
[Ref.: #65379]	aspartate ChEBI	+	energy source
[Ref.: #65379]	aspartate ChEBI	+	nitrogen source
[Ref.: #65379]	casein	+	hydrolysis
[Ref.: #65379]	cellobiose ChEBI	-	builds acid from
[Ref.: #65379]	creatine ChEBI	-	carbon source
[Ref.: #65379]	creatine ChEBI	-	energy source
[Ref.: #65379]	D-arabinose ChEBI	-	builds acid from
[Ref.: #65379]	D-arabinose ChEBI	-	carbon source
[Ref.: #65379]	D-arabinose ChEBI	-	energy source
[Ref.: #65379]	D-arabitol ChEBI	-	builds acid from
[Ref.: #65379]	D-fructose ChEBI	+	builds acid from
[Ref.: #65379]	D-fucose ChEBI	-	builds acid from
[Ref.: #65379]	D-galactose ChEBI	-	builds acid from
[Ref.: #65379]	D-galactose ChEBI	-	carbon source
[Ref.: #65379]	D-galactose ChEBI	-	energy source
[Ref.: #65379]	D-glucose ChEBI	-	builds acid from
[Ref.: #65379]	D-glucose ChEBI	+	builds acid from
[Ref.: #65379]	D-glucose ChEBI	+	carbon source
[Ref.: #65379]	D-glucose ChEBI	+	energy source
[Ref.: #65379]	D-glucose ChEBI	+	fermentation
[Ref.: #65379]	D-lyxose ChEBI	+	builds acid from
[Ref.: #65379]	D-mannitol ChEBI	-	builds acid from
[Ref.: #65379]	D-mannitol ChEBI	-	carbon source
[Ref.: #65379]	D-mannitol ChEBI	-	energy source
[Ref.: #65379]	D-mannose ChEBI	-	builds acid from
[Ref.: #65379]	D-mannose ChEBI	+	builds acid from
[Ref.: #65379]	D-mannose ChEBI	+	carbon source
[Ref.: #65379]	D-mannose ChEBI	+	energy source
[Ref.: #65379]	D-ribose ChEBI	-	builds acid from
[Ref.: #65379]	D-ribose ChEBI	+	carbon source
[Ref.: #65379]	D-ribose ChEBI	+	energy source
[Ref.: #65379]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #65379]	D-sorbitol ChEBI	-	carbon source
[Ref.: #65379]	D-sorbitol ChEBI	-	energy source
[Ref.: #65379]	D-tagatose ChEBI	-	builds acid from
[Ref.: #65379]	D-trehalose ChEBI	-	builds acid from
[Ref.: #65379]	D-trehalose ChEBI	+	carbon source
[Ref.: #65379]	D-trehalose ChEBI	+	energy source
[Ref.: #65379]	D-xylose ChEBI	-	builds acid from
[Ref.: #65379]	D-xylose ChEBI	+	builds acid from
[Ref.: #65379]	D-xylose ChEBI	+	carbon source
[Ref.: #65379]	D-xylose ChEBI	+	energy source
[Ref.: #65379]	decanoate ChEBI	-	assimilation
[Ref.: #65379]	dna ChEBI	+	hydrolysis
[Ref.: #65379]	erythritol ChEBI	-	builds acid from
[Ref.: #65379]	esculin ChEBI	+	hydrolysis
[Ref.: #65379]	esculin ferric citrate	+	builds acid from
[Ref.: #65379]	esculin ferric citrate	+	hydrolysis
[Ref.: #65379]	galactitol ChEBI	-	builds acid from
[Ref.: #65379]	gelatin ChEBI	+	hydrolysis
[Ref.: #65379]	gentiobiose ChEBI	+	builds acid from
[Ref.: #65379]	glucose ChEBI	-	fermentation
[Ref.: #65379]	glutamine ChEBI	-	carbon source
[Ref.: #65379]	glutamine ChEBI	-	energy source
[Ref.: #65379]	glutamine ChEBI	-	nitrogen source
[Ref.: #65379]	glycerol ChEBI	-	builds acid from
[Ref.: #65379]	glycerol ChEBI	-	carbon source
[Ref.: #65379]	glycerol ChEBI	-	energy source
[Ref.: #65379]	glycine ChEBI	-	carbon source
[Ref.: #65379]	glycine ChEBI	-	energy source
[Ref.: #65379]	glycine ChEBI	-	nitrogen source
[Ref.: #65379]	glycogen ChEBI	+	builds acid from
[Ref.: #65379]	inulin ChEBI	-	builds acid from
[Ref.: #65379]	isoleucine ChEBI	+	carbon source
[Ref.: #65379]	isoleucine ChEBI	+	energy source
[Ref.: #65379]	isoleucine ChEBI	+	nitrogen source
[Ref.: #65379]	L-alanine ChEBI	+	carbon source
[Ref.: #65379]	L-alanine ChEBI	+	energy source
[Ref.: #65379]	L-alanine ChEBI	+	nitrogen source
[Ref.: #65379]	L-arabinose ChEBI	-	assimilation
[Ref.: #65379]	L-arabinose ChEBI	-	builds acid from
[Ref.: #65379]	L-arabitol ChEBI	-	builds acid from
[Ref.: #65379]	L-arginine ChEBI	-	hydrolysis
[Ref.: #65379]	L-arginine ChEBI	+	carbon source
[Ref.: #65379]	L-arginine ChEBI	+	energy source
[Ref.: #65379]	L-arginine ChEBI	+	nitrogen source
[Ref.: #65379]	L-asparagine ChEBI	+	carbon source
[Ref.: #65379]	L-asparagine ChEBI	+	energy source
[Ref.: #65379]	L-asparagine ChEBI	+	nitrogen source
[Ref.: #65379]	L-cysteine ChEBI	+	carbon source
[Ref.: #65379]	L-cysteine ChEBI	+	energy source
[Ref.: #65379]	L-cysteine ChEBI	+	nitrogen source
[Ref.: #65379]	L-fucose ChEBI	-	builds acid from
[Ref.: #65379]	L-glutamate ChEBI	+	carbon source
[Ref.: #65379]	L-glutamate ChEBI	+	energy source
[Ref.: #65379]	L-glutamate ChEBI	+	nitrogen source
[Ref.: #65379]	L-histidine ChEBI	+	carbon source
[Ref.: #65379]	L-histidine ChEBI	+	energy source
[Ref.: #65379]	L-histidine ChEBI	+	nitrogen source
[Ref.: #65379]	L-leucine ChEBI	-	carbon source
[Ref.: #65379]	L-leucine ChEBI	-	energy source
[Ref.: #65379]	L-leucine ChEBI	-	nitrogen source
[Ref.: #65379]	L-lysine ChEBI	+	carbon source
[Ref.: #65379]	L-lysine ChEBI	+	energy source
[Ref.: #65379]	L-lysine ChEBI	+	nitrogen source
[Ref.: #65379]	L-proline ChEBI	+	carbon source
[Ref.: #65379]	L-proline ChEBI	+	energy source
[Ref.: #65379]	L-proline ChEBI	+	nitrogen source
[Ref.: #65379]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #65379]	L-serine ChEBI	+	carbon source
[Ref.: #65379]	L-serine ChEBI	+	energy source
[Ref.: #65379]	L-serine ChEBI	+	nitrogen source
[Ref.: #65379]	L-sorbose ChEBI	-	builds acid from
[Ref.: #65379]	L-threonine ChEBI	+	carbon source
[Ref.: #65379]	L-threonine ChEBI	+	energy source
[Ref.: #65379]	L-threonine ChEBI	+	nitrogen source
[Ref.: #65379]	L-tyrosine ChEBI	+	carbon source
[Ref.: #65379]	L-tyrosine ChEBI	+	energy source
[Ref.: #65379]	L-tyrosine ChEBI	+	nitrogen source
[Ref.: #65379]	L-xylose ChEBI	-	builds acid from
[Ref.: #65379]	lactose ChEBI	-	carbon source
[Ref.: #65379]	lactose ChEBI	-	energy source
[Ref.: #65379]	lactose ChEBI	-	builds acid from
[Ref.: #65379]	malate ChEBI	+	assimilation
[Ref.: #65379]	maltose ChEBI	+	carbon source
[Ref.: #65379]	maltose ChEBI	+	energy source
[Ref.: #65379]	maltose ChEBI	-	builds acid from
[Ref.: #65379]	maltose ChEBI	+	builds acid from
[Ref.: #65379]	melezitose ChEBI	+	builds acid from
[Ref.: #65379]	melibiose ChEBI	-	builds acid from
[Ref.: #65379]	methionine ChEBI	-	carbon source
[Ref.: #65379]	methionine ChEBI	-	energy source
[Ref.: #65379]	methionine ChEBI	-	nitrogen source
[Ref.: #65379]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #65379]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #65379]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #65379]	myo-inositol ChEBI	-	builds acid from
[Ref.: #65379]	myo-inositol ChEBI	-	carbon source
[Ref.: #65379]	myo-inositol ChEBI	-	energy source
[Ref.: #65379]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #65379]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #65379]	nitrate ChEBI	-	reduction
[Ref.: #65379]	phenylacetate ChEBI	-	assimilation
[Ref.: #65379]	phenylalanine ChEBI	+	carbon source
[Ref.: #65379]	phenylalanine ChEBI	+	energy source
[Ref.: #65379]	phenylalanine ChEBI	+	nitrogen source
[Ref.: #65379]	potassium 2-dehydro-D-gluconate	-	builds acid from
[Ref.: #65379]	potassium 5-dehydro-D-gluconate	-	builds acid from
[Ref.: #65379]	potassium gluconate ChEBI	-	assimilation
[Ref.: #65379]	potassium gluconate ChEBI	-	builds acid from
[Ref.: #65379]	pyruvate ChEBI	+	carbon source
[Ref.: #65379]	pyruvate ChEBI	+	energy source
[Ref.: #65379]	raffinose ChEBI	-	carbon source
[Ref.: #65379]	raffinose ChEBI	-	energy source
[Ref.: #65379]	raffinose ChEBI	-	builds acid from
[Ref.: #65379]	ribitol ChEBI	-	builds acid from
[Ref.: #65379]	ribose ChEBI	-	builds acid from
[Ref.: #65379]	salicin ChEBI	-	builds acid from
[Ref.: #65379]	salicin ChEBI	+	builds acid from
[Ref.: #65379]	salicin ChEBI	+	carbon source
[Ref.: #65379]	salicin ChEBI	+	energy source
[Ref.: #65379]	sodium citrate ChEBI	-	assimilation
[Ref.: #65379]	starch ChEBI	-	hydrolysis
[Ref.: #65379]	starch ChEBI	+	builds acid from
[Ref.: #65379]	sucrose ChEBI	-	builds acid from
[Ref.: #65379]	sucrose ChEBI	-	carbon source
[Ref.: #65379]	sucrose ChEBI	-	energy source
[Ref.: #65379]	trehalose ChEBI	-	builds acid from
[Ref.: #65379]	tryptophan ChEBI	+	carbon source
[Ref.: #65379]	tryptophan ChEBI	+	energy source
[Ref.: #65379]	tryptophan ChEBI	+	nitrogen source
[Ref.: #65379]	turanose ChEBI	-	builds acid from
[Ref.: #65379]	tween 20 ChEBI	+	hydrolysis
[Ref.: #65379]	tween 80 ChEBI	-	hydrolysis
[Ref.: #65379]	urea ChEBI	+	hydrolysis
[Ref.: #65379]	valine ChEBI	-	carbon source
[Ref.: #65379]	valine ChEBI	-	energy source
[Ref.: #65379]	valine ChEBI	-	nitrogen source
[Ref.: #65379]	xylitol ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #65379]	ampicillin ChEBI				yes	350	µg (disc)
[Ref.: #65379]	chloramphenicol ChEBI	yes	80	µg (disc)
[Ref.: #65379]	erythromycin ChEBI	yes	200	µg (disc)
[Ref.: #65379]	kanamycin ChEBI				yes	60	µg (disc)
[Ref.: #65379]	nalidixic acid ChEBI	yes	100	µg (disc)
[Ref.: #65379]	neomycin sulfate ChEBI				yes	80	µg (disc)
[Ref.: #65379]	rifampicin ChEBI	yes	5	µg (disc)
[Ref.: #65379]	streptomycin ChEBI	yes	500	µg (disc)

	Metabolite production	Metabolite	Production
[Ref.: #65379]		acetoin ChEBI	no
[Ref.: #65379]		hydrogen sulfide ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #65379]		acetoin ChEBI	-
[Ref.: #65379]		glucose ChEBI		-

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #65379]		catalase	+	1.11.1.6
[Ref.: #65379]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65379]	Sample type/isolated from	rhizosphere of Triticum aestivum L.
[Ref.: #65379]	Sampling date	2016-04
[Ref.: #65379]	Geographic location (country and/or sea, region)	irrigation area of Xiaokai River in Binzhou, Shandong province
[Ref.: #65379]	Country	China
[Ref.: #65379]	Country ISO 3 Code	CHN
[Ref.: #65379]	Continent	Asia
[Ref.: #65379]	Geographic location	37.6158°/117.7710°
[Ref.: #65379]	Enrichment culture	lysogeny broth agar
[Ref.: #65379]	Enrichment culture duration	7 days
[Ref.: #65379]	Enrichment culture temperature	30 ̊C
[Ref.: #65379]	Isolation/enrichment procedure	Five grams of the collected rhizosphere soil was suspended in 100 ml sterile water, and then diluted and spread onto lysogeny broth agar, followed by incubation at 30°C for 7 days.

[Ref.: #67771]	Sample type/isolated from	From soil
[Ref.: #67771]	Geographic location (country and/or sea, region)	the seaside saline soil of BinZhou
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65379]	Luteimonas sp. strain SF4-12 16S ribosomal RNA gene, partial sequence	MF924393		GenBank ENA

[Ref.: #65379]

GC-content

69.5 mol%

genome sequence analysis

Availability in culture collections External links

[Ref.: #65379]

Culture collection no.

CCTCC AB 2016261, KCTC 52585

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Luteimonas chenhongjianii, a novel species isolated from rectal contents of Tibetan Plateau pika (Ochotona curzoniae).	Zhang G, Lai XH, Yang J, Jin D, Pu J, Xiong Y, Yang C, Dong K, Huang Y, Luo X, Lu S, Xu J	Int J Syst Evol Microbiol	10.1099/ijsem.0.004151	2020	*
Phylogeny	Luteimonas rhizosphaerae sp. nov., isolated from the rhizosphere of Triticum aestivum L.	Zhao GY, Shao F, Zhang M, Zhang XJ, Wang JY, Fan SJ, Dai MX	Int J Syst Evol Microbiol	10.1099/ijsem.0.002649	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65379

Guo-Yan Zhao, Fei Shao, Mi Zhang, Xue-Jie Zhang, Jing-Yuan Wang, Shou-Jin Fan, Mei-Xue Dai: Luteimonas rhizosphaerae sp. nov., isolated from the rhizosphere of Triticum aestivum L.. IJSEM 68: 1197 - 1203 2018 ( DOI 10.1099/ijsem.0.002649 , PubMed 29473821 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
* These data were automatically processed and therefore are not curated

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