Name: Actinoplanes deserti DSM 46879
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158476

Type strain:

Species: Actinoplanes deserti

Culture col. no.: DSM 46879, KCTC 39543, YIM CF22, JCM 30626, CCTCC AB 2018113

Strain history: <- Wenjun Li, Yunnan Univ.

NCBI tax ID(s): 1742686 (species)

SI-ID 401620

DSM 46879

Section

Actinoplanes deserti DSM 46879 is an aerobe, mesophilic bacterium that was isolated from desert soil.

aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Actinoplanes*
	Species	**Actinoplanes deserti**
	Full Scientific Name (LPSN)	Actinoplanes deserti Habib et al. 2019

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #65152]	growth	28 °C
[Ref.: #67770]	growth	28 °C
[Ref.: #67771]	growth	28 °C

[Ref.: #65152]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

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Observation

quinones: MK-9(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65152]	Sample type/isolated from	desert soil
[Ref.: #65152]	Geographic location (country and/or sea, region)	Xinjiang Uyghur Autonomous Region, Turpan (42° 12' 33'' N, 89° 17' 47' E)
[Ref.: #65152]	Country	China
[Ref.: #65152]	Country ISO 3 Code	CHN
[Ref.: #65152]	Continent	Asia
[Ref.: #65152]	Geographic location	42.2092°/89.2964°

[Ref.: #67770]	Sample type/isolated from	Desert soil from Turpan in Xinjiang Uyghur Autonomous Region
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	from a desert soil sample collected from Turpan in Xinjiang Uyghur Autonomous Region
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Desert
#Environmental	#Terrestrial	#Soil
#Condition	#Xerophilic	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65152]	Actinoplanes sp. YIM CF22 16S ribosomal RNA gene, partial sequence	KT946775	1482	ENA	1742686 tax ID

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GC-content

70.8 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

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Culture collection no.

DSM 46879, KCTC 39543, YIM CF22, JCM 30626, CCTCC AB 2018113

[Ref.: #111272]

SI-ID 401620

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Actinoplanes deserti sp. nov., isolated from a desert soil sample.	Habib N, Khan IU, Chu X, Xiao M, Li S, Fang BZ, Zhi XY, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-018-1121-x	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65152

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46879

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#111272

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401620.1 )

* These data were automatically processed and therefore are not curated

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