Name: Thiobacter sp. SL-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158329

Type strain:

Species: Thiobacter sp.

Strain Designation: SL-1

Culture col. no.: DSM 23043, ATCC BAA-1515

Strain history: <- D. Emerson, Bigelow Lab. for Ocean Sci., Maine, USA; SL-1 <- D. Emerson {2004}

NCBI tax ID(s): 2583236 (species)

SI-ID 397902

DSM 23043

Section

Thiobacter sp. SL-1 is a mesophilic bacterium that was isolated from hot spring rich in iron.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	[Burkholderiales, not assigned to family]
	Genus	*Thiobacter*
	Full Scientific Name (LPSN)	Thiobacter Hirayama et al. 2005

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65005]

Culture medium

THIOBACTER MJ MEDIUM (DSMZ Medium 1011a)

[Ref.: #65005]

Culture medium growth

[Ref.: #65005]

Culture medium link

Medium recipe at MediaDive

[Ref.: #65005]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #65005]			growth	37 °C

[Ref.: #65005]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65005]	Sample type/isolated from	hot spring rich in iron
[Ref.: #65005]	Geographic location (country and/or sea, region)	Sulphur Springs Volcanic Park near Soufrière
[Ref.: #65005]	Country	Saint Lucia
[Ref.: #65005]	Country ISO 3 Code	LCA
[Ref.: #65005]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Thermal spring

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HM145961 (>99% sequence identity) for Thiobacter from Microbeatlas

Aquatic Samples	1286
Soil Samples	716
Animal Samples	212
Plant Samples	121
Total Samples	2335

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65005]	Thiobacter sp. SL-1 16S ribosomal RNA gene, partial sequence	HM145961	1390	ENA	861379 tax ID

Availability in culture collections External links

[Ref.: #65005]

Culture collection no.

DSM 23043, ATCC BAA-1515

[Ref.: #111137]

SI-ID 397902

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65005

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23043

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#111137

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397902.1 )

* These data were automatically processed and therefore are not curated

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