Name: Streptococcus halichoeri subsp. hominis CCUG 67100
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 156927

Type strain:

Species: Streptococcus halichoeri subsp. hominis

Culture col. no.: CCUG 67100, LMG 28801

NCBI tax ID(s): 2033848 (subspecies)

Section

Streptococcus halichoeri subsp. hominis CCUG 67100 is a microaerophile, mesophilic bacterium that was isolated from Human blood,67-year-old man with sepsis.

mesophilic
microaerophile
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Streptococcaceae*
	Genus	*Streptococcus*
	Species	"Streptococcus halichoeri subsp. hominis"
	Full Scientific Name (LPSN)	Streptococcus halichoeri subsp. hominis Shewmaker et al. 2016

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #63380]			growth	37 °C

[Ref.: #63380]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63380]

Oxygen tolerance

microaerophile

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #63380]	Sample type/isolated from	Human blood,67-year-old man with sepsis
[Ref.: #63380]	Sampling date	2006-11-27
[Ref.: #63380]	Geographic location (country and/or sea, region)	NC,Raleigh
[Ref.: #63380]	Country	USA
[Ref.: #63380]	Country ISO 3 Code	USA
[Ref.: #63380]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host	#Human	#Male
#Host Body Product	#Fluids	#Blood
#Infection	#Inflammation	-
#Infection	#Patient	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptococcus halichoeri CCUG67100	GCA_009870745	contig	GenBank	254785 tax ID	*
[Ref.: #66792]	Streptococcus halichoeri strain CCUG67100	254785.37	wgs	PATRIC	254785 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptococcus halichoeri strain CCUG67100 PATRIC: 254785.37
[Ref.: #69480]	motile	no	95.764	no
[Ref.: #69480]	gram-positive	yes	94.071	no
[Ref.: #69480]	anaerobic	no	91.486	yes
[Ref.: #69480]	aerobic	no	95.641	yes
[Ref.: #69480]	halophile	yes	89.229	no
[Ref.: #69480]	spore-forming	no	94.692	no
[Ref.: #69480]	glucose-util	yes	91.796	no
[Ref.: #69480]	flagellated	no	98.568	no
[Ref.: #69480]	thermophile	no	99.037	yes
[Ref.: #69480]	glucose-ferment	yes	88.546	no

Availability in culture collections External links

[Ref.: #63380]

Culture collection no.

CCUG 67100, LMG 28801

Literature:

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Phenotypic, Genotypic, and Antimicrobial Characteristics of Streptococcus halichoeri Isolates from Humans, Proposal To Rename Streptococcus halichoeri as Streptococcus halichoeri subsp. halichoeri, and Description of Streptococcus halichoeri subsp. hominis subsp. nov., a Bacterium Associated with Human Clinical Infections.	Shewmaker PL, Whitney AM, Humrighouse BW	J Clin Microbiol	10.1128/JCM.03214-15	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#63380 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 67100

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Streptococcus halichoeri strain CCUG67100

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