Name: Arcobacter lanthieri CCUG 66485
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 156896

Type strain:

Species: Arcobacter lanthieri

Culture col. no.: CCUG 66485, LMG 28516

NCBI tax ID(s): 1355374 (species)

SI-ID 396422

LMG 28516, CCUG 66485

Special Collections

CCUG

Other strains from Arcobacter lanthieri

Section

Arcobacter lanthieri CCUG 66485 is a microaerophile, Gram-negative bacterium that was isolated from Manure tank,pigs and dairy cattle.

Gram-negative
microaerophile
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Epsilonproteobacteria*
	Order	*Campylobacterales*
	Family	*Arcobacteraceae*
	Genus	*Arcobacter*
	Species	**Arcobacter lanthieri**
	Full Scientific Name (LPSN)	Arcobacter lanthieri Whiteduck-Léveillée et al. 2015

Synonym

Aliarcobacter lanthieri

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %97.288

[Ref.: #63334]

Incubation period

2 days

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #63334]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63334]

Oxygen tolerance

microaerophile

[Ref.: #69480]

Ability of spore formation

no Confidence in %92.758

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #63334]	Sample type/isolated from	Manure tank,pigs and dairy cattle
[Ref.: #63334]	Sampling date	2010-08-06
[Ref.: #63334]	Geographic location (country and/or sea, region)	Ontario,Ottawa
[Ref.: #63334]	Country	Canada
[Ref.: #63334]	Country ISO 3 Code	CAN
[Ref.: #63334]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Livestock (Husbandry)
#Engineered	#Built environment	#Container (Reservoir)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aliarcobacter lanthieri LMG 28516	GCA_013201625	complete	GenBank ENA	1355374 tax ID	*
[Ref.: #66792]	Arcobacter lanthieri strain LMG 28516	1355374.14	complete	PATRIC	1355374 tax ID	*
[Ref.: #66792]	Aliarcobacter lanthieri LMG 28516	GCA_024584095	contig	GenBank ENA	1355374 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Arcobacter lanthieri strain LMG 28516 PATRIC: 1355374.14
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	84	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aliarcobacter lanthieri LMG 28516 NCBI: GCA_013201625.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.288	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	72.98	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	77.737	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	92.758	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	87.076	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	72.246	no

Availability in culture collections External links

[Ref.: #63334]

Culture collection no.

CCUG 66485, LMG 28516

[Ref.: #110056]

SI-ID 396422

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Arcobacter lanthieri sp. nov., isolated from pig and dairy cattle manure.	Whiteduck-Leveillee K, Whiteduck-Leveillee J, Cloutier M, Tambong JT, Xu R, Topp E, Arts MT, Chao J, Adam Z, Andre Levesque C, Lapen DR, Villemur R, Talbot G, Khan IUH	Int J Syst Evol Microbiol	10.1099/ijs.0.000318	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#63334 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 66485

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#110056

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396422.1 )

* These data were automatically processed and therefore are not curated

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Arcobacter lanthieri strain LMG 28516

Aliarcobacter lanthieri LMG 28516

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