Name: Shewanella seohaensis CCUG 60900
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 156261

Type strain:

Species: Shewanella seohaensis

Culture col. no.: CCUG 60900, KCTC 23556T

NCBI tax ID(s): 755175 (species)

SI-ID 408509

CCUG 60900

Section

Shewanella seohaensis CCUG 60900 is an aerobe, mesophilic bacterium that was isolated from Tidal flat sediment.

aerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Shewanellaceae*
	Genus	*Shewanella*
	Species	**Shewanella seohaensis**
	Full Scientific Name (LPSN)	Shewanella seohaensis Yoon et al. 2012

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #62489]			growth	30 °C

[Ref.: #62489]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #62489]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #62489]	Sample type/isolated from	Tidal flat sediment
[Ref.: #62489]	Sampling date	2007
[Ref.: #62489]	Geographic location (country and/or sea, region)	western coast
[Ref.: #62489]	Country	Republic of Korea
[Ref.: #62489]	Country ISO 3 Code	KOR
[Ref.: #62489]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Tidal flat
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Shewanella seohaensis CCUG 60900	GCA_023283775	contig	GenBank	755175 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Shewanella seohaensis CCUG 60900 NCBI: GCA_023283775.1
[Ref.: #69480]	flagellated	yes	89.609	no
[Ref.: #69480]	gram-positive	no	98.986	no
[Ref.: #69480]	anaerobic	no	95.11	yes
[Ref.: #69480]	aerobic	yes	60.009	no
[Ref.: #69480]	halophile	no	64.034	no
[Ref.: #69480]	spore-forming	no	95.513	no
[Ref.: #69480]	motile	yes	92.65	no
[Ref.: #69480]	glucose-ferment	no	66.607	no
[Ref.: #69480]	thermophile	no	99.642	yes
[Ref.: #69480]	glucose-util	yes	91.496	no

Availability in culture collections External links

[Ref.: #62489]

Culture collection no.

CCUG 60900, KCTC 23556T

[Ref.: #109532]

SI-ID 408509

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Shewanella seohaensis sp. nov., isolated from a tidal flat sediment.	Yoon JH, Park S, Jung YT, Lee JS	Antonie Van Leeuwenhoek	10.1007/s10482-012-9722-2	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#62489 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 60900

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#109532

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID408509.1 )

* These data were automatically processed and therefore are not curated

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