Name: Campylobacter oricanis CCUG 57310
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 155317

Type strain:

Species: Campylobacter oricanis

Culture col. no.: CCUG 57310

Other strains from Campylobacter oricanis

C. oricanis CCUG 57305

Section

Campylobacter oricanis CCUG 57310 is a microaerophile, mesophilic, motile prokaryote that was isolated from Dog,oral plaque.

motile
mesophilic
microaerophile
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

[Ref.: #61281]	Phylum	Not assigned to order
[Ref.: #61281]	Class	Not assigned to order
[Ref.: #61281]	Order	Not assigned to order
[Ref.: #61281]	Family	Not assigned to family
[Ref.: #61281]	Genus	Campylobacter
[Ref.: #61281]	Species	Campylobacter oricanis
[Ref.: #61281]	Type strain

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.995

[Ref.: #69480]	Motility	yes Confidence in %96.048

[Ref.: #61281]

Incubation period

2 days

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #61281]			growth	37 °C

[Ref.: #61281]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #61281]

Oxygen tolerance

microaerophile

[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #61281]	Sample type/isolated from	Dog,oral plaque
[Ref.: #61281]	Geographic location (country and/or sea, region)	Göteborg
[Ref.: #61281]	Country	Sweden
[Ref.: #61281]	Country ISO 3 Code	SWE
[Ref.: #61281]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Canidae (Dog)
#Host Body-Site	#Oral cavity and airways	#Plaque

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Campylobacter sp. CCUG 57310	GCA_013201975	complete	GenBank	2517362 tax ID	*
[Ref.: #66792]	Campylobacter sp. CCUG 57310	2517362.3	complete	PATRIC	2517362 tax ID	*
[Ref.: #66792]	Campylobacter sp. CCUG 57310	2916548114	complete	JGI IMG/M	2517362 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Campylobacter sp. CCUG 57310 CCUG 57310 NCBI: GCA_013201975.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Campylobacter sp. CCUG 57310 CCUG 57310 NCBI: GCA_013201975.1
[Ref.: #69480]	motile	yes	89.535	no
[Ref.: #69480]	flagellated	yes	65.41	no
[Ref.: #69480]	gram-positive	no	98.829	no
[Ref.: #69480]	anaerobic	no	63.555	yes
[Ref.: #69480]	aerobic	no	97.811	no
[Ref.: #69480]	halophile	no	84.33	no
[Ref.: #69480]	spore-forming	no	94.501	no
[Ref.: #69480]	glucose-util	no	87.013	no
[Ref.: #69480]	thermophile	no	92.252	no
[Ref.: #69480]	glucose-ferment	no	88.492	no

Availability in culture collections External links

[Ref.: #61281]

Culture collection no.

CCUG 57310

References
#61281 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 57310

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Search for species Campylobacter oricanis in external resources:
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PANGAEA
StrainInfo
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Campylobacter sp. CCUG 57310 CCUG 57310

Campylobacter sp. CCUG 57310 CCUG 57310

Change proposal

Change proposal